| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1309 |
|---|
| Symbol | |
|---|
| ID | 6313904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1410905 |
|---|
| End bp | 1412605 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642650026 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_001924015 |
|---|
| Protein GI | 188580570 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGA GCACGAGCGT ATCCCCCTCA CGCCCCCGCG GGGGCGCCTC TCGTGAGCGA
TCCCACCGGG ACGGGATCGG CCTCGCCGTC GTCAAGGATG CGGAGCGCGA GATCGAGATG
AACGCAATGG CCCTTTCCGT CGCCGTCACC CCCGAGCCGG CCGAGGATGC GCTGGCGGCG
CGGCTGATCG AGATGACGGT CGAGGACTGC CAGCGCGCCT TTGCCGAGGG CAGCGTCACC
GCGGAAGCGC TGGCGCAGGC CTTCCTGGCG CGGATCGAGA CCTACAACCC GCGCTACAAG
GCGCTCATCG TGATGAATCC GCAGGCACTC GACGATGCCC GCGCCATCGA TGCCCGCCGG
GCGGCCGGCG AGACGCTGGG GCCGCTCGCG GGCGTGCCCG TGGTCATCAA GGACACGATG
GACATGGCCG GCCTGCCGAG CACCGGCGGC TGGCACTTCC TGAGCGCCGA AGCCGGCGGC
GTCGACCTGA TCCCGGCCAC CGACGCGCCG GTGACGGCGC GGATGCGCGA GGCCGGCTGC
GTCATCCTCG GCAAGACCAA CGTGCCGGTG CTGAGCCATA CCGGCAGCCA CGCCAACGAT
TCCTGGGCCG GCCCCACCCT CAACCCGGCC GCGCCCGACC GCATCCCCGG CGGGTCGAGC
GCCGGCACCG CCACGGCGGT GGCCGCGAGC CTCGCCGTCC TGGGGCTCGC CGAGGAGACC
GGCGGTTCGA TCCAGAACCC GGCCTCGGCG CAGGGTCTGG TCGGCATCAA GCCGAGCTTC
GGCCTCGTGC CGAATGCCGG CGTGATGCCG CTGGCCGGCA GCACCCGCGA CGTGGTCGGG
CCGATCGCCC GCTGCGTGCG CGACGCCGCG CTCACCCTCG ATGCGCTCGC CGGCTACACC
GCCGCCGATC CCAAAACCGT GGCCGGCATC GGCAAGCGCC CGGCGGGCGG CTACACCGCC
GGCCTCGAAC CCGGCGCCCT GGCCGGCAAG CGCCTCGGCC TCTACGGACC CGGCTGGCGC
GATCTGCCGC TCTCGGAAGA GGCGTCCGCC CTCTACGCCC GGGCGCAGGC CGAACTCGAG
GCCGCCGGCG CCACCCTGGT GGCCGACCCC TTCGCCGGCA CGGATTTCGC CGCCATCGCC
GAGCCGACGC CGGGCCTCGT CTACTTCGAC GCCCGCGGCT TCGAATCCGC GCCCTACGAC
CTCCAGCTCT ACCTGGAGCG GATGGGGCCG GACGTGGCGA TCCGCAGCTT TGCCGCCTTT
GCCGAGGCCA CCAAGGCGGA GGACGCCTTC GCGCCGGGCG GCGTGCTGCA CCCGATCACC
AACCTGCGCC AGCTCGCCGC CTGCCTCGCC GATCCGGCGA GCCCGCCCGA CGTCTCCGAC
TTCCTCGCCG CCCGCGAAGC CTATCTCGCG GTCTTCGACC GGGTGATGGC GGAGCACGGG
CTCGACGCCC TGGTCTTCCC GCAGATGCGG GCCGAACTGC CGCCGCTGCA CGGGCCCGGC
ACGCTGCTCG AGACCACGGT CTGCGAGATC AACATCGCCG GCCTGCCGGG GGTGACGCTG
CCGGCGGGCG CCTACGCCTC CGGCTCGCCG TTCAACCTGA TCTTCGTCGG CCGGATGTGG
AGCGAGGGCG ACCTGCTCGC CTGTGCCTAC GCCTACGAGC AGGCGACGCA TCACCGCCGC
GCCCCGGCCC TCGACGCCTG A
|
|---|
| Protein sequence | MTASTSVSPS RPRGGASRER SHRDGIGLAV VKDAEREIEM NAMALSVAVT PEPAEDALAA
RLIEMTVEDC QRAFAEGSVT AEALAQAFLA RIETYNPRYK ALIVMNPQAL DDARAIDARR
AAGETLGPLA GVPVVIKDTM DMAGLPSTGG WHFLSAEAGG VDLIPATDAP VTARMREAGC
VILGKTNVPV LSHTGSHAND SWAGPTLNPA APDRIPGGSS AGTATAVAAS LAVLGLAEET
GGSIQNPASA QGLVGIKPSF GLVPNAGVMP LAGSTRDVVG PIARCVRDAA LTLDALAGYT
AADPKTVAGI GKRPAGGYTA GLEPGALAGK RLGLYGPGWR DLPLSEEASA LYARAQAELE
AAGATLVADP FAGTDFAAIA EPTPGLVYFD ARGFESAPYD LQLYLERMGP DVAIRSFAAF
AEATKAEDAF APGGVLHPIT NLRQLAACLA DPASPPDVSD FLAAREAYLA VFDRVMAEHG
LDALVFPQMR AELPPLHGPG TLLETTVCEI NIAGLPGVTL PAGAYASGSP FNLIFVGRMW
SEGDLLACAY AYEQATHHRR APALDA
|
|---|
| |