| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1291 |
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| Symbol | |
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| ID | 6313407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1388347 |
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| End bp | 1391604 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 642650008 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001923997 |
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| Protein GI | 188580552 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATCCCCA CAGGCGCCCT CGCGATCGCC CTGCTCGGCT TCGCCCAGAC CGCCCGGCCG
CTGATCCACG TGGCCCGCGA CGGGCGCCGC CTCGAGGATG TCGCCGCCGT CCTGCGCGCC
CTCGCGCCGG AGCGGACGGT GGCGGTCTAT CCGGAATGGG ATTGCCTGCC CTTCGACCGT
GCCTCGCCCT CGCGCGGCGT CATGGGCGCC CGCACCGGCG TGCTGCGCTG GCTGACCGAC
GAACAGGCCC GGCCGGACAT CGTGCTCACC ACCGCCCCCG CTCTTCTGCA GCGCGTCCCC
CCGCCGGAGA CGTGGGACGC GGCCCATGTC GAGCTGCGTG TCGGCGAGGC CCTCGATCCG
GAGCGGCTGA CGGCCGAGCT GGGGCGGCTC GGCTACATCC TCGACGACCG GGTCGACGAG
CCCGGCGAGG TCGCGGTCCG CGGGCGCACC ATCGACGTGT TCCCGGCCGC CGCGCCGCTG
CCCTGCCGGG TCGAGCACGA CGGCACCCGC ATCACCGCGA TCCGTTCCTA CGATCCGGTG
TCGCAGCGCT CCCGGGTCGA GACCGATCGG CTGGTGATCG ACCCCGCCAC CGAGATCATC
CTCGCCTCGG ATTCGGGCGT CGCGCTCGAA CCCTTCACCG GACAGGAGCA CCGGCTCGCA
CGGTTCTATC CCAAACTCGT GACGGTCCTC GACTACGTGC CCCAGGCGCG GTTCGTGGTC
GAGGACGGGA TGGAGGAGCG CGCCGCCGCC TTCTTCGAGC AGATCGCCGA GGGAAGCGAG
CAGGACGGCT CGAACACCGG GAACGGGCCG GATGAACCCC GCCGGGCGTC GGCGGCGGAC
CTCTACCTCT CGCCCGACGA GTGGACGGCG CTCGTCGACG CGCGCAGCCT CGCCGTGGCG
ACGGGCGCCG AGGCGGAGCG GGTCGCCGGG CCGGTCTTCG CCCGCGAGCG CCGCCCCGAG
ACGGGTTTCG CCAAGGCCCT GCGCGCGGCG CTCAAGGCGG GCGAGCGCGT GGTGCTCGCC
GGCCCCAAGG CGCCCCTGCG CCGCCTCGTG CGGGCGGCGG CCGCCATCGA TGACCGGACC
GTGCGCCTGA TCGACGGCTG GGCCGAGGTC GAGGCGGCGG AGCCCGGCGC GATGCTGGCG
ATCGAGGCGC CGGTCGAGGC GGGGTTCCGC GTGCCGGAGG CCGGCGCGAC GGTGATCGCC
GCCGCCGACC TGTTCGGGCC CCTGGCCGCG GGCGCGCAGC GGCGAGCCGC GGTGCTGCCG
ATCGGCGAGG TCGAGCTGCG CGTCGGCGAT GTCGCGATCG ACCGCGACCA CGGCCTGTGC
GTGTTCGAGG GGCTGGAGGC GATCCGCGCC GGCGAGGAGG ACGAGGAGGA CGCCCTGCGC
CTGCGGTTCG CCGACGAGGC CATCCTGATG GTTCCGGTGA GCCAGGCCGA CCGGATCTGG
CGCTACGGCT CGGAGGCCGA GGCCGTGACG CTCGACCGGC TCGACGGCGG CACCTGGGCC
CGGCGGCGCC TGGAGGCGGA GGCGACGCTC GCCAAGGCCG CGCGGGCGAT GCTGAAGGCG
GCGCAGGAGC GCCGGAAGGC GCATGCGCCG CAGATCGTGC CGCCGGAGCG CGAGATGGAG
CGCTTCGCCG CCGGCTTCGG CTTCCCGCTC ACCGGCGATC AGGCCGGTGC GGTGGAGGAG
ACCCTGGACG ACCTCGCCCG CGAGGCGCCG ATGGACCGGC TGGTCTGCGG CGATGTCGGC
TTCGGCAAGA CGGAGGTGGC GCTGCGTGCC GCCGCCGCGG CGCTCTTCGC CGGCCGGCAG
GTCGCCGTCA TGGCGCCGAC CACGGTGCTG GTGCGCCAGC ATGTCGAGAC GTTTCGGCGG
CGGTTTGCCC GTTTCGGCAT CGAGGTGGCG CATCTCTCAC GCCTCGTCTC CCCCGCCGAG
GCCAAGCGGG TAAAGCGGGG GCTGGCCGAC GGCAGCGTGC GCCTCGTGGT CGGCACCCAG
GCGCTCGCCG GGCGCGGCGT CGCCTTCCAC GATCTCGGGC TCGCCATCAT CGACGAGGAG
CAGCGCTTCG GGGCCAAGAC CAAGGCGAGC CTGCGCAAGG CGGCGGGCGA TGCCCACATC
CTGACCTTGA GCGCGACGCC GATCCCGCGC ACGCTCCAGG CGGCGATGGT CGGCCTGCAG
AGCCTCAGCG TCATCGCCAC GCCCCCGGCG GTGCGCCAGC CGATCCGTAC GGTGATCGCC
CCGTTCGAGG AGGCGACGCT GGCCGCGGCC CTGCGGCGCG AGCATCGCCG CGGCGGCCAG
AGCTTCGTGG TCTGCCCGCG CATTGAGGAC ATCGCGCCCA TGGCCAAGCG CCTGCGCAGC
CTCGTGCCGG GGCTCGCGGT CGTGATCGCG CACGGCGAGA TGAAGCCGGC CGAGATGGAC
GACGCCATGG TCCGCTTCGC CGACGGCGAC GGCGACGTGC TGCTCGCCAC CAGCATCATC
GAGAGCGGCC TCGACGTGCC GCGGGCCAAC ACCATGCTGG TCTGGGACGC GGAGCGGTTC
GGCCTCGCGC AGCTGCACCA GTTGCGCGGC CGGGTCGGGC GCGGGCAGCG GCGCGGGGTG
GTCTACCTGT TCGGGCATCC CGACAAGCCC CTCAGCCCCT CCACCGAGAA GCGGCTGCGC
ACGCTGGAGG CCCTCGACCG GCTCGGCGCG GGATTCGCCA TCTCCGCCCG CGACCTCGAC
CTGCGCGGTG CGGGCGATCT CGTCGGCGAC GACCAGTCGG GCCATGTCAA GCTCGTCGGT
CTCGGCCTCT ACCAGCACCT GCTGCAACTG GCGCTCCGCG CGGCCAAGGG CGAGGCGGCC
GAGGATTGGA GCCCGGAGGT GCGGATCGGC CTGAACGGCC GTGTGCCCGC CGACTACATC
CCGGAGCCCG AGATCCGCCT GAGCCTCTAT ACCCGCCTGC TGCGCCTGCG CACCGAGGCC
GAGATCGACG CCCTGCGCGA CGAGATCGAG GACCGGTTCG GGCCGCTTCC CGGTTCGGTG
GAGGCGCTGT TCACGCTGGC CGCCCTGCGG ATCGGATGCC TCGCCCTCGG CATCGCCCGC
CTCAATGGCG GACCGCAGGG GATCGCGGCC GATTTCCATC CGGACCGGAC CGCGCCGGTG
ATCCCGGTGT CCGACGACAT CACGGTGCGC GAGGGCCGCA TCGTCCTGCG CCGGGGGGGC
GAGGATCCGG TCGAGCGCGG ACGTCAGGCC GCGGCGTTCC TGCGCCGGCT CGAAGAGGCA
CGCGACCGGC GCGCCTGA
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| Protein sequence | MIPTGALAIA LLGFAQTARP LIHVARDGRR LEDVAAVLRA LAPERTVAVY PEWDCLPFDR
ASPSRGVMGA RTGVLRWLTD EQARPDIVLT TAPALLQRVP PPETWDAAHV ELRVGEALDP
ERLTAELGRL GYILDDRVDE PGEVAVRGRT IDVFPAAAPL PCRVEHDGTR ITAIRSYDPV
SQRSRVETDR LVIDPATEII LASDSGVALE PFTGQEHRLA RFYPKLVTVL DYVPQARFVV
EDGMEERAAA FFEQIAEGSE QDGSNTGNGP DEPRRASAAD LYLSPDEWTA LVDARSLAVA
TGAEAERVAG PVFARERRPE TGFAKALRAA LKAGERVVLA GPKAPLRRLV RAAAAIDDRT
VRLIDGWAEV EAAEPGAMLA IEAPVEAGFR VPEAGATVIA AADLFGPLAA GAQRRAAVLP
IGEVELRVGD VAIDRDHGLC VFEGLEAIRA GEEDEEDALR LRFADEAILM VPVSQADRIW
RYGSEAEAVT LDRLDGGTWA RRRLEAEATL AKAARAMLKA AQERRKAHAP QIVPPEREME
RFAAGFGFPL TGDQAGAVEE TLDDLAREAP MDRLVCGDVG FGKTEVALRA AAAALFAGRQ
VAVMAPTTVL VRQHVETFRR RFARFGIEVA HLSRLVSPAE AKRVKRGLAD GSVRLVVGTQ
ALAGRGVAFH DLGLAIIDEE QRFGAKTKAS LRKAAGDAHI LTLSATPIPR TLQAAMVGLQ
SLSVIATPPA VRQPIRTVIA PFEEATLAAA LRREHRRGGQ SFVVCPRIED IAPMAKRLRS
LVPGLAVVIA HGEMKPAEMD DAMVRFADGD GDVLLATSII ESGLDVPRAN TMLVWDAERF
GLAQLHQLRG RVGRGQRRGV VYLFGHPDKP LSPSTEKRLR TLEALDRLGA GFAISARDLD
LRGAGDLVGD DQSGHVKLVG LGLYQHLLQL ALRAAKGEAA EDWSPEVRIG LNGRVPADYI
PEPEIRLSLY TRLLRLRTEA EIDALRDEIE DRFGPLPGSV EALFTLAALR IGCLALGIAR
LNGGPQGIAA DFHPDRTAPV IPVSDDITVR EGRIVLRRGG EDPVERGRQA AAFLRRLEEA
RDRRA
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