| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1286 |
|---|
| Symbol | |
|---|
| ID | 6313402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1381939 |
|---|
| End bp | 1382679 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642650003 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001923992 |
|---|
| Protein GI | 188580547 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4674] Uncharacterized ABC-type transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR03411] urea ABC transporter, ATP-binding protein UrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGTTC TCGAAATCCG CGACCTGCAC AAGAGCTTCG GCGGCACCAA GGTCATCAAC
GGCTTCAGCC TCGACGTGAC CGAACTGACC CTGTGCTGCC TCGTCGGCCC CAACGGGGCC
GGCAAGACCA CCACCATGGA CCTCATCACC GGGCGCCAGA AACCGACCTC GGGCTCCATC
GTCCTGCGCG GCGACGACAT CACGAGTTTG AGCGAGCACG AGATCGCCCA GCGCGGCATC
GGGCGCAAAT TCCAGGTGCC GGCGGTGTTC CGCGAGTTGA GCGTGCGCCA GAACTTCGAG
GTGGCCTATT CCCGCGAGGT CAACCCGTTC CGCAACATGC TGCGGCGGCG CCCGGCGGGC
TTCTCGGCCA AGCTCGACGA GGTCGCCACC CTCACCGGCC TCAAGGACCG TCTCGACGTC
GAGGCGGGCT TCCTCTCCCA CGGCGAGACG CAGTGGCTCG AGATCGGCAT GGTGCTGATG
CAGAACCCGG CGATCCTGCT CCTCGACGAG CCGGTCGCGG GCATGACCGA GTCCGAGATC
GAGAAGACCA TCGTCTTCCT CAACGAACTC AAGCGCACCA ACACCCTGAT CGTGGTCGAG
CACGACATGG GCTTCGTCCG GCAGATCGCC GACGTGGTGA CGGTGATGCA CATGGGCGCC
TTCCTGGCGC AGGGAAAGCT CAGCGACATC GAGAACGACC CGCGGGTGCG AGAGGTCTAT
CTCGGCGAGC CGGAGGTCTG A
|
|---|
| Protein sequence | MGVLEIRDLH KSFGGTKVIN GFSLDVTELT LCCLVGPNGA GKTTTMDLIT GRQKPTSGSI
VLRGDDITSL SEHEIAQRGI GRKFQVPAVF RELSVRQNFE VAYSREVNPF RNMLRRRPAG
FSAKLDEVAT LTGLKDRLDV EAGFLSHGET QWLEIGMVLM QNPAILLLDE PVAGMTESEI
EKTIVFLNEL KRTNTLIVVE HDMGFVRQIA DVVTVMHMGA FLAQGKLSDI ENDPRVREVY
LGEPEV
|
|---|
| |