| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1253 |
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| Symbol | |
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| ID | 6313278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1342117 |
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| End bp | 1343628 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642649970 |
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| Product | hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit |
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| Protein accession | YP_001923959 |
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| Protein GI | 188580514 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00657617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTGTGA TCAAGGCCAA GGATCTGACC GACAGCGTGG CCGACGCGCT GCAATACATC
AGCTACTATC ATCCACTCGA CTACATCCAG GCGCTGGCCG AGGCCTATGG GCGCGAGGAA
GCGCCGGCCG CCCGGGACGC CATCGCGCAG ATCCTCACCA ACAGCCGGAT GTCGGCCGAA
GGCCACCGCC CCGTCTGCCA GGATACCGGC ATCGTCACGG TGTTCGTGAA GTGGGGGCAG
GGCTGCACGC TGGATTCGGA CCTGAGCCTT CAGGCGGTGA TCGACGAGGG CGTGCGCCGC
GCCTATCTCG ACCCGTCGAA CCCGTTGCGG GCGTCGATCG TCTCCGATCC GGCCTTCACG
CGGAAGAACA CCCGCGACAA CACCCCGAGC GTCCTCCACG TCGAGATGGT GCCGGGCGAC
ACGGTCGAGG TGACCGTCGC GGCGAAGGGC GGCGGCTCGG AGAACAAGGC CAAGTTCAAG
ATGCTCAACC CGTCCGACTC GCTGGTCGAT TGGGTGCTGG AGACCGTGCC GACCATGGGC
GCCGGCTGGT GCCCGCCCGG GATGCTGGGG ATCGGCATCG GCGGCACGGC GGAGAAGGCC
ATGGTAATGG CCAAGGAATC GCTCATGGCG CCGATCGACA TGGCGCAGCT CAAGGCGCGG
GGACCGGCCA ACGACATCGA GGCGCTGCGC ATCGAGCTGC ACGACCGGGT CAACGCCCTC
GGCATCGGGG CGCAGGGGCT CGGCGGCCTC ACGACGGTGC TCGACGTCAA GATCCTCGAC
TGGCCGACGC ATGCGGCCTC GAAGCCCGTG GCGATGATCC CGAACTGCGC GGCGACGCGT
CACGCGCATG TCGTGCTCGA CGGCTCCGGC CCGGCCTTCC TGCCGGCCCC CGACCTCGCC
GCCTGGCCCG CCGTCGAATG GGCGCCCGAC GCGCAGGCCC GCCGCGTCGA TCTCGACAGG
CTGACGCCGG CCGAGGTCGA GTCCTGGAAG GCGGGCGACC GGCTGCTCCT GTCCGGCCGC
ATGCTCACGG GCCGGGACGC GGCGCACAAG CGCATCCAGG ACATGCTCGC CCGCGGAGAG
CCGCTGCCGG TCTCGTTCGA CAACCGCGTC ATCTACTATG TCGGGCCGGT CGATCCGGTG
GGCGGCGAGG CCGTGGGCCC GGCAGGGCCC ACGACCGCGA CCCGCATGGA CAAGTTCACC
GACACGATGC TCGGCCTCGG CCTGCTGGCG ATGATCGGCA AGGCGGAGCG CGGCGAGGCG
GCGGTCGCGG CGATCAAGGC GCACCGGCGC GCCTATCTCA GCGCGGTGGG CGGAGCCGCC
TATCTCGTCT CGCGGGCGAT CCGCTCAAGC CGCGTCCTCG CCTTCGCCGA TCTCGGCATG
GAGGCGATCT ACGAGTTCGA GGTCAAGGAC ATGCCGGTGA CCGTGGCGGT GACGGCGCAA
GGGGACAACG TCCACGCCTC GGGGCCGAGC GCTTGGCGCC AGCCGGTCTT CGTGTCGTCG
CGCACGGGCT GA
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| Protein sequence | MPVIKAKDLT DSVADALQYI SYYHPLDYIQ ALAEAYGREE APAARDAIAQ ILTNSRMSAE
GHRPVCQDTG IVTVFVKWGQ GCTLDSDLSL QAVIDEGVRR AYLDPSNPLR ASIVSDPAFT
RKNTRDNTPS VLHVEMVPGD TVEVTVAAKG GGSENKAKFK MLNPSDSLVD WVLETVPTMG
AGWCPPGMLG IGIGGTAEKA MVMAKESLMA PIDMAQLKAR GPANDIEALR IELHDRVNAL
GIGAQGLGGL TTVLDVKILD WPTHAASKPV AMIPNCAATR HAHVVLDGSG PAFLPAPDLA
AWPAVEWAPD AQARRVDLDR LTPAEVESWK AGDRLLLSGR MLTGRDAAHK RIQDMLARGE
PLPVSFDNRV IYYVGPVDPV GGEAVGPAGP TTATRMDKFT DTMLGLGLLA MIGKAERGEA
AVAAIKAHRR AYLSAVGGAA YLVSRAIRSS RVLAFADLGM EAIYEFEVKD MPVTVAVTAQ
GDNVHASGPS AWRQPVFVSS RTG
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