| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1247 |
|---|
| Symbol | |
|---|
| ID | 6313306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1334528 |
|---|
| End bp | 1335922 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649964 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001923953 |
|---|
| Protein GI | 188580508 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.092171 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACGC TGCTCCTGCG CCACATCGCC CACCTCGCCA CCTTCGACGA CGCGGCCCGC
GAGATCACCG ACGGCGCGCT CTACCTGCGC GACCACGTGA TCGAGGCCGT CGGCACCGAT
GCCGAACTCG GCGCGCGTCC GGCCGACCGG GTGATCGACC TGTCCGGCCA TCTCGTGATG
CCCGGCATGG TCAACACCCA CCATCACATG TACCAGAACC TGACCCGGGT GATGGTCCAG
GACGAGCCGC TCTTCACGTG GCTGTCCACG CTCTACCCGA TCTGGGCGCG CCTCGACGAC
GCGGCGATCC ACGTCTCCGC CCGGGTGGCG ATGGCCGAGC TGATCGCCTC GGGCTGCACC
ACCAGTTCGG ACCACCTCTA TATCCGGCCC AACGACGTCA CGCTCGATTC CACGATCGCG
GCGGCGCAAG GCATCGGCCT GCGCTTCCAC GCGGCGCGCG GGGCGATGTC GCGCGGGCAG
AGCCAGGGCG GGCTGCCCCC CGATTCCTGC GTCGAGCGCG AGGCGGACAT CCTCAAGGAT
GCCGAGCGGC TGATCCACGC CCACCACGAC CCGGCCCGGC ACGCGATGAC CCGCATCGTG
CTGGCCCCCT GCTCGCCCTT CTCGGTGACG CCGGGCCTGA TGCGGGAGGC GGCCGCGCTC
GCCCGTGCCC ACGGCGTTCA CCTCCACACC CATCTCGCCG AGGATCTCGA CGAGGAGGTC
TGGTGCCGCG ACGCCTACGG AATGCGCCCG GCCGCCTTCG CGGAATCGGT GGGCTGGACC
GGCCCGGACG TGTGGTTCGC CCACGCGATC TTCCTCGATT CGAACGAGAT CCGGCGCTTT
GCCGAAACCG GAACCGGCAT GACGCATTGC CCCTCGGCCA ACATGCGCTG CGGCCAGGGC
ATCGCCAAGA TCCGCGAGAT GCTCGATGCC GGCATGACCT GCGGGCTCGG GGTCGACGGC
TCCGCCTCGA ACGACACCTC GAACCTCTTC CTCGAAGCCC GGCTGGCGCA GCTGCTCCAG
CGGGTGGCCC CGGCCCGCTA CGGCTCGGAA GCCCCCGGCG GCCGCGGCGG GTTCGGCGGC
ACGCCGGGCG CCCTGTCGGC GCGGGAAGCG CTGACCATGG CCACCCGCGG CGGCGCGAAG
CTGCTCGGCC GGGACGACAT CGGCCACCTC GCCCCCGGCA TGAGCGCGGA TGTCATCGCG
GTGAAGCTCG ACCAGCTCGG CCTCTCCGGC ACGCAGCGCG ATCCGCTGGC CGCGATGGTG
ATGTGCGGGC CGTTCCGGGT CTCGCACAGC GTCATCCACG GACGCCCGAT CATCGCCGAC
GGCGCCTTCT GCGATCTCGA CCTCGACGCG CTGCTCGCCG AGCACGCCGC CACGATGGCC
CGGATCTGGC AATGA
|
|---|
| Protein sequence | MPTLLLRHIA HLATFDDAAR EITDGALYLR DHVIEAVGTD AELGARPADR VIDLSGHLVM
PGMVNTHHHM YQNLTRVMVQ DEPLFTWLST LYPIWARLDD AAIHVSARVA MAELIASGCT
TSSDHLYIRP NDVTLDSTIA AAQGIGLRFH AARGAMSRGQ SQGGLPPDSC VEREADILKD
AERLIHAHHD PARHAMTRIV LAPCSPFSVT PGLMREAAAL ARAHGVHLHT HLAEDLDEEV
WCRDAYGMRP AAFAESVGWT GPDVWFAHAI FLDSNEIRRF AETGTGMTHC PSANMRCGQG
IAKIREMLDA GMTCGLGVDG SASNDTSNLF LEARLAQLLQ RVAPARYGSE APGGRGGFGG
TPGALSAREA LTMATRGGAK LLGRDDIGHL APGMSADVIA VKLDQLGLSG TQRDPLAAMV
MCGPFRVSHS VIHGRPIIAD GAFCDLDLDA LLAEHAATMA RIWQ
|
|---|
| |