Gene Mpop_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1246 
Symbol 
ID6313305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1333579 
End bp1334514 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content75% 
IMG OID642649963 
Productinner-membrane translocator 
Protein accessionYP_001923952 
Protein GI188580507 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.139079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCTGA TCACCGGCAT CCTGTCGACG GCGCTCCTGG CGGGCGGGGT CCTCGCCCTC 
GCGGCGCTCG GCGAGGTGCT CGCCGAACGC GTCGGCGTGG TCAATCTCGG GGTCGAGGGG
CTGATGTCGC TGGGTGCGCT CACCGGCGTC GCCACCGTGG CCGCCGTGCC GAGCCCGACC
CTCGGTTTCG CCGCGGCGCT GGCCGTCGGG TTCGCCTTCG GCTGCGTCTT CGCCGCCGCC
ACCGTGCTGC TGCGGGCCAA CCAAGTCCTG TGCGGGCTCG CCCTCACGCT GCTCGGATCC
GGGCTCGCGG CGACGCTGGG CCGCTCCTAT GCCGGCGCCC CGGCCGCCGC GGTCTTCCCG
CGGGTCGCGG TGCCGGGGCT CGCCGACATC CCGGTGCTCG GCCCGGCGCT GTTCTCGCAG
AACGTGCTGA TCTACGCGAT CTACATCGTC CTGCCGGTCG GGCTGCATCT CCTGCTGTTC
CGGACGCGGC ACGGGTTGAA CCTGCGCGCG GTCGGCGAGA ACCCGGCCGC GGCGGACGCC
GCCGGCATCC CGGTCGCGGC GATCCGGTTC TGGTACGTCG CCCTCGGGTC GAGCCTCGCC
GGGGGCGCGG GGGCCTACCT GACGCTCGCC TTCGTGCCGT CCTGGTCGGA GGGCGTGGTC
GCCGGCCGCG GCTGGATCGC GGTCGCCCTC GTCATCTTCG CCGGCTTCCG GCCGCTGACG
GCGGTGGCCG CCGCGCTGCT GTTCGGCGTC ATCACGGCGC TCGGCTTCGT CGGCCAGGCC
CGCGGCTGGC CGGTGGCGCC CGCGATCCTC TCGATGCTGC CCTATCTCGG CACCGTCGCG
TTCATCATCC TGCCGGTGGT GGCGTGGCGG CGCCTGCGCG GCTGGTTCGC GGCGCCCGCC
GCCCTCGGCC TGCCCTACCA CCGCGACGTG CGCTGA
 
Protein sequence
MDLITGILST ALLAGGVLAL AALGEVLAER VGVVNLGVEG LMSLGALTGV ATVAAVPSPT 
LGFAAALAVG FAFGCVFAAA TVLLRANQVL CGLALTLLGS GLAATLGRSY AGAPAAAVFP
RVAVPGLADI PVLGPALFSQ NVLIYAIYIV LPVGLHLLLF RTRHGLNLRA VGENPAAADA
AGIPVAAIRF WYVALGSSLA GGAGAYLTLA FVPSWSEGVV AGRGWIAVAL VIFAGFRPLT
AVAAALLFGV ITALGFVGQA RGWPVAPAIL SMLPYLGTVA FIILPVVAWR RLRGWFAAPA
ALGLPYHRDV R