Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1244 |
Symbol | |
ID | 6309817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1330903 |
End bp | 1332504 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642649961 |
Product | ABC transporter related |
Protein accession | YP_001923950 |
Protein GI | 188580505 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.21787 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGGTGC CGCTCGCGTT CCCGCCCGGC ACGGCCGCGG ACGCGGCGTC CGGACGCCCG CCCGCGATCC CGCCCGGAAC CCCCGCCCTC GTCGAATTGC AGGGGATCAC CAAGGCGTTT CCGGGCGTGC TCGCCAACGA CGCGGTCGAT CTGACGGTGA AGCCCGGGGA GATCCACGCG CTGCTCGGCG AGAACGGGGC CGGCAAGTCG ACGCTGATGA ACATCCTCAC CGGCATCTAC CAGCCCGATG CCGGCACGAT CATCCTCGAC GGCTATGCCC GCGCGCTGCC CTCGCCGCAG GCGGCGATCC GTGCCGGGAT CGGCATGGTG CACCAGCACT TCAAGCTGGT GCCGGCCTTC ACGGTGGCCG AGAACATTCA TCTCGGCTGG TCACGCACGC CCTGGCGCGC TTCGGCGGCG GCGCTGGAAG CGCGCACGCG GGCGCTCGCC GAGCGCTTCA ACCTCGCGGT GCGGCCGGAC GCGGTCGTCG GCGACCTCTC GGCCGGCGAG CAGCAGCGGG TCGAGATCCT CCGGGTTCTG GCCCGCGACG CCCGTCTCCT GATCCTCGAC GAGCCGACCG CCGTGCTGAC GCCCGCGGAG GCGCGGGAGC TGTTTGCGGC CCTGCGGGCG TTCCGCGCCT CCGGCAACGC CGTGATCTTC ATCAGCCACA AGCTCGACGA GGTCGTCGCC ATCGCCGACC GGATCAGCGT GCTGCGCGGG GGCCGGAAGG TCGCGACGCG CCCCGCCGCC GGCGCGGACG AGCGCGGCCT CGCGAGCCTG ATGGTCGGCC ACGACATCAC CCTGCGGAAA GCCCGCCCGC GGGCGGCCGG CACGCCGGTC TCGGCGGCCC CGGTGCTCGA ACTCGATCGT GTCTGCGCCC GCGACGACCG CGGCCTCATG GCGCTCCGCG ACGTCACGCT CGCCCTGCAC GGCGGCGAGA TCCTGGGCAT CGCCGGCGTC GCCGGCAACG GGCAGCGCGA ACTGAGCCAA GTCGTCACCG GCATGCGCCA GGTCACGCAA GGGGCGGTCC GGATCGACGG CCGGCCCGTG GCCCGGACGG ATGCGGCGGC CTTCGCGGCC GCCGGCATCG GCCATATCCC GGAGGATCGC CTGCGCAGCG GCCTCGCGCC CGACCTCAGC GTCGCCGACA ACGCGGTGCT GCGGGACTAT GCGCGCCCGC CCGTCGGCAA GGGCGGCCTG TTCCGGCCCT GGGCGGCGGC GCGCCTTGCC CGGACCCTGG CCGCCGAATC CGCCGTCGCG GTGCCGGATT TCGGCATGCC CGTGCGCAAC CTCTCGGGCG GCAACCAGCA GCGCCTCGTC GCCCGGCGCG AGATCCGCAT CGCCGAGCGG GTCCTCGTCG CCGCCTATCC GAGCCGGGGG CTCGATGTCG GCGCGATCGA CACCCTGCTC TCCTACCTCG CGGAGCTGCG CGACCGCGGC AGGGCGGTGC TGCTCTTCTC CGAGGAGCTG GAGGAGATCC TCGAACTCGC CGACCGGGTG GCGGTGCTGT TCGAGGGGCG GATCATGGGG GTGATGCCCG CCGCCGCGGC GGATGTGGAG ACGCTGGGAC TGATGATGGG CGGTCGGGGC GCGCACGCAT GA
|
Protein sequence | MGVPLAFPPG TAADAASGRP PAIPPGTPAL VELQGITKAF PGVLANDAVD LTVKPGEIHA LLGENGAGKS TLMNILTGIY QPDAGTIILD GYARALPSPQ AAIRAGIGMV HQHFKLVPAF TVAENIHLGW SRTPWRASAA ALEARTRALA ERFNLAVRPD AVVGDLSAGE QQRVEILRVL ARDARLLILD EPTAVLTPAE ARELFAALRA FRASGNAVIF ISHKLDEVVA IADRISVLRG GRKVATRPAA GADERGLASL MVGHDITLRK ARPRAAGTPV SAAPVLELDR VCARDDRGLM ALRDVTLALH GGEILGIAGV AGNGQRELSQ VVTGMRQVTQ GAVRIDGRPV ARTDAAAFAA AGIGHIPEDR LRSGLAPDLS VADNAVLRDY ARPPVGKGGL FRPWAAARLA RTLAAESAVA VPDFGMPVRN LSGGNQQRLV ARREIRIAER VLVAAYPSRG LDVGAIDTLL SYLAELRDRG RAVLLFSEEL EEILELADRV AVLFEGRIMG VMPAAAADVE TLGLMMGGRG AHA
|
| |