| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1241 |
|---|
| Symbol | |
|---|
| ID | 6309814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1328503 |
|---|
| End bp | 1329156 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 642649958 |
|---|
| Product | Rieske (2Fe-2S) domain protein |
|---|
| Protein accession | YP_001923947 |
|---|
| Protein GI | 188580502 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.635525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.124818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC CGGACGGGTG GTATGCGGTC GCGCTGGGCG CCGACATCGA GCCGTCGACC
TCGGCGGGCA CGCGCCTGTT CGGCCACGAA CTCGTGGTCT GGCGCGACGC CGCGGGCGCC
GTGCATGTCT GGGAGGATCG CTGCCCGCAT CGCGGCATGC GCCTGAGCTT CGGCTTCGTG
CGCGGCGATC ACATCGCCTG CCTCTATCAC GGCTGGCGCT ACGACGCGGC CGGCCAGTGC
CGCTTCATCC CGGCCCATCC GGATCTCGAC GTGAGCCCGA TGATCCGGAC GCGGACCTAT
CCGTGCCGCG AGCGCGCCAG GCTGATCTGG GTCCGCTGGG GCGCGCCGGC CGACGCCCCC
GAGACCGCGC CGGACGCTGC CGAGGCCGTC CCCGTCTCGC CCCTGCGCAG CCTCTATGTC
GACGCGCCGG CCGCGCGCCT CGCCGTGGCG CTCGGCGGCG CCGGGTCCGA CGGGCTGACC
CGCATCGATC TCGACGGGTC GTCCGTCCTC GTCGCGGTGC AGCCCCTCGC CGCGGAGGCG
AGCGCGGCGC ATATCGTGGT GCCGGCCCCG CCCGATGCGC CGGCCGCCGA CCTCGCCCGC
CTCGCCGCCG CCTGCGTCGC CCTGCGCCGG AGCATCGAGG GAGCCGCGCC GTGA
|
|---|
| Protein sequence | MDEPDGWYAV ALGADIEPST SAGTRLFGHE LVVWRDAAGA VHVWEDRCPH RGMRLSFGFV
RGDHIACLYH GWRYDAAGQC RFIPAHPDLD VSPMIRTRTY PCRERARLIW VRWGAPADAP
ETAPDAAEAV PVSPLRSLYV DAPAARLAVA LGGAGSDGLT RIDLDGSSVL VAVQPLAAEA
SAAHIVVPAP PDAPAADLAR LAAACVALRR SIEGAAP
|
|---|
| |