| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1237 |
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| Symbol | |
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| ID | 6309810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1325651 |
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| End bp | 1326322 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642649954 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_001923943 |
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| Protein GI | 188580498 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0422665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.190035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTCG AACCCCAAGC CTTCGAACCC CAAGCCTTCG AACCCCAAGA CTCCGGCCCG
TCGATGACGC GCTACGCCTG CATGCAGCGC CTCGCGGCGC GCCTGCGGGA CGAACTCGTG
ATCCTGTCCC TCGGGGGCAG CGTGGACGAG TGGTACGACG CGGCGCCGCA TATGCGCGCC
GCCAGCCTGT TCCAGCAGCA GCTCGGCTGC GTCACGCCCC AGGCCTTCGG CCTCGCCGCC
GGGCTGCCGC ACCGGCGCAT CGTCTCGCTC GACACCGACG GGGGGCTGCT GTTCAACCTC
GGCATCCTCG CCACGCTGGG CAACGAGCAG CCGAAGAACC TGTTCGTCGT CGTCTGGGAC
AACCAGTGCT ACCAGTCGAT CGGCGGGCCG CCGACCCACA CCGCCAAGGG CCGTGTCGAC
CTCGCGGCGA TCGCCCGCGG CGCCGGCGTC GCGCACGCCT ACACGGTCCA CGACCTCGAC
GGCTTCGAGC GGCATTGCGC CGAGGGGCTC GCGGCCGAGG CCCCCTACCT CGTCGTCGCC
AAGGTGGCCG GCACCGTCCA GCCCGGCATC CGGCGCAAGC ACAGCGACGG GCGCGAGGAC
AAGTACATCT TCGTGCGCCA CGTGGAGGCG AGCGAGGGCG TCACCATCAT GGGCCCGAGC
GAGCACAATT AA
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| Protein sequence | MSLEPQAFEP QAFEPQDSGP SMTRYACMQR LAARLRDELV ILSLGGSVDE WYDAAPHMRA
ASLFQQQLGC VTPQAFGLAA GLPHRRIVSL DTDGGLLFNL GILATLGNEQ PKNLFVVVWD
NQCYQSIGGP PTHTAKGRVD LAAIARGAGV AHAYTVHDLD GFERHCAEGL AAEAPYLVVA
KVAGTVQPGI RRKHSDGRED KYIFVRHVEA SEGVTIMGPS EHN
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