Gene Mpop_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1208 
Symbol 
ID6309989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1291499 
End bp1292875 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content73% 
IMG OID642649926 
Producttwo component, sigma54 specific, transcriptional regulator, Fis family 
Protein accessionYP_001923915 
Protein GI188580470 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.320827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.373488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCTG AGGCGGAACT GCCCGAGGCC GAGCCGGCCG TGCCCCCTGC GCGGGTCGTG 
CTGATCGACG ACGAGGCGAT GGTCCGGCTT GCCATGGAGC AGGCGCTGCA GCTCGCCGGC
CTCGCGGTCG AGGCCTACGC GAGCGCCGAG GCGGCGCTTC CGGCCATCAC CCGCGACTTC
TCCGGCATCG TCGTCAGCGA CGTGCGCCTG CCGGGCCGCG ACGGCCTCGC CCTACTGGCC
GAGATCCGCC GCCGCGACCC CGAATTGCCG GTGGTGCTCG TCACCGGCCA CGGCGACATC
GCCATGGCGG TCGCCGCCAT GCGCGAGGGC GCCTACCATT TCATCGAGAA GCCCTTCGTC
AACGAGGCCT TCGTCGAGGT GGTCCGCCGC GCCCTGGAGA AGCGGGCGCT GGTGACCGAG
AACCGCCGCC TGCGCCACGC CCTCGACCGG GGCGACGCGC CCGGCGGCGC GGTGGAGCGC
TGCCTCGTCG GCCAGTCGCC CGCCATGCGG CGGCTGCGGG ACGATGTCGC CTCGCTCGCC
TCCGCCGCCG CCGACGTGCT GGTGCTCGGC GAGACCGGGG CCGGCAAGGA GCAGGTCGCC
CGCGCCCTGC ACGAGGGCGG CCGCCGCCGG GACAAGCCGT TCGTCGCGAT CAATTGCGGC
GCAATCCCCG AGAGCATGTT CGAGAGCGAG ATCTTCGGCC ACGAGGCCGG CGCCTTCACC
GGGGCGGGCA AGCGCCGCAT CGGCAAGGTC GAGCACGCGA GCGGCGGCAC CCTGTTTCTC
GACGAGGTCG AGAGCATGCC GCTGGCGCTA CAGGTGAAGC TGCTGCGGGT GCTGCAGGAG
CGGCGCGTCG AGCGGCTCGG CTCCAATGCG AGCGTGCCGG TGGACCTGCG GGTGGTCGCC
GCCACCAAGG AGGATCTCGA CGCGCTCTCC GAGGCCGGGC GCTTCCGCCG CGACCTGTTC
TTCCGCCTCA ACGTCGTCAC CCTGACCCTG CCGCCCCTGC GCGAACGGCG CGAGGACATC
CCGCTGCTGT TCGAGCGCTT TCTCGTCCAG GCGGCGGTGA AGTACCAGCG CCCGGTGGTC
GAGGTGCCGC CGTCCTTGCG CCGCTCGCTG ATGCTCGCCG ACTGGCCGGG CAACGTGCGC
GAATTGAAGA ACGCCGCCGA GCGGGCCGTG CTCGGTTTCC TCAGCCCGGA TCTGGCCGGC
GGTCCCGAGG CGGCGCCGGG GCTCGACGCC CTGCTCGACC GGGTGGAGCG CCTCGTCATC
GAGGACGCGC TGAAGGCCTC CGGTCAGCGC ATCGCCGAGG CCGCCCGGGC GCTCGGCCTG
CCGCGCAAGA CGCTCTCCGA CCGCATGCGG CGCCTCGGCC TGAGCGCGGG CGACTGA
 
Protein sequence
MFPEAELPEA EPAVPPARVV LIDDEAMVRL AMEQALQLAG LAVEAYASAE AALPAITRDF 
SGIVVSDVRL PGRDGLALLA EIRRRDPELP VVLVTGHGDI AMAVAAMREG AYHFIEKPFV
NEAFVEVVRR ALEKRALVTE NRRLRHALDR GDAPGGAVER CLVGQSPAMR RLRDDVASLA
SAAADVLVLG ETGAGKEQVA RALHEGGRRR DKPFVAINCG AIPESMFESE IFGHEAGAFT
GAGKRRIGKV EHASGGTLFL DEVESMPLAL QVKLLRVLQE RRVERLGSNA SVPVDLRVVA
ATKEDLDALS EAGRFRRDLF FRLNVVTLTL PPLRERREDI PLLFERFLVQ AAVKYQRPVV
EVPPSLRRSL MLADWPGNVR ELKNAAERAV LGFLSPDLAG GPEAAPGLDA LLDRVERLVI
EDALKASGQR IAEAARALGL PRKTLSDRMR RLGLSAGD