Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1208 |
Symbol | |
ID | 6309989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1291499 |
End bp | 1292875 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642649926 |
Product | two component, sigma54 specific, transcriptional regulator, Fis family |
Protein accession | YP_001923915 |
Protein GI | 188580470 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.320827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.373488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCCTG AGGCGGAACT GCCCGAGGCC GAGCCGGCCG TGCCCCCTGC GCGGGTCGTG CTGATCGACG ACGAGGCGAT GGTCCGGCTT GCCATGGAGC AGGCGCTGCA GCTCGCCGGC CTCGCGGTCG AGGCCTACGC GAGCGCCGAG GCGGCGCTTC CGGCCATCAC CCGCGACTTC TCCGGCATCG TCGTCAGCGA CGTGCGCCTG CCGGGCCGCG ACGGCCTCGC CCTACTGGCC GAGATCCGCC GCCGCGACCC CGAATTGCCG GTGGTGCTCG TCACCGGCCA CGGCGACATC GCCATGGCGG TCGCCGCCAT GCGCGAGGGC GCCTACCATT TCATCGAGAA GCCCTTCGTC AACGAGGCCT TCGTCGAGGT GGTCCGCCGC GCCCTGGAGA AGCGGGCGCT GGTGACCGAG AACCGCCGCC TGCGCCACGC CCTCGACCGG GGCGACGCGC CCGGCGGCGC GGTGGAGCGC TGCCTCGTCG GCCAGTCGCC CGCCATGCGG CGGCTGCGGG ACGATGTCGC CTCGCTCGCC TCCGCCGCCG CCGACGTGCT GGTGCTCGGC GAGACCGGGG CCGGCAAGGA GCAGGTCGCC CGCGCCCTGC ACGAGGGCGG CCGCCGCCGG GACAAGCCGT TCGTCGCGAT CAATTGCGGC GCAATCCCCG AGAGCATGTT CGAGAGCGAG ATCTTCGGCC ACGAGGCCGG CGCCTTCACC GGGGCGGGCA AGCGCCGCAT CGGCAAGGTC GAGCACGCGA GCGGCGGCAC CCTGTTTCTC GACGAGGTCG AGAGCATGCC GCTGGCGCTA CAGGTGAAGC TGCTGCGGGT GCTGCAGGAG CGGCGCGTCG AGCGGCTCGG CTCCAATGCG AGCGTGCCGG TGGACCTGCG GGTGGTCGCC GCCACCAAGG AGGATCTCGA CGCGCTCTCC GAGGCCGGGC GCTTCCGCCG CGACCTGTTC TTCCGCCTCA ACGTCGTCAC CCTGACCCTG CCGCCCCTGC GCGAACGGCG CGAGGACATC CCGCTGCTGT TCGAGCGCTT TCTCGTCCAG GCGGCGGTGA AGTACCAGCG CCCGGTGGTC GAGGTGCCGC CGTCCTTGCG CCGCTCGCTG ATGCTCGCCG ACTGGCCGGG CAACGTGCGC GAATTGAAGA ACGCCGCCGA GCGGGCCGTG CTCGGTTTCC TCAGCCCGGA TCTGGCCGGC GGTCCCGAGG CGGCGCCGGG GCTCGACGCC CTGCTCGACC GGGTGGAGCG CCTCGTCATC GAGGACGCGC TGAAGGCCTC CGGTCAGCGC ATCGCCGAGG CCGCCCGGGC GCTCGGCCTG CCGCGCAAGA CGCTCTCCGA CCGCATGCGG CGCCTCGGCC TGAGCGCGGG CGACTGA
|
Protein sequence | MFPEAELPEA EPAVPPARVV LIDDEAMVRL AMEQALQLAG LAVEAYASAE AALPAITRDF SGIVVSDVRL PGRDGLALLA EIRRRDPELP VVLVTGHGDI AMAVAAMREG AYHFIEKPFV NEAFVEVVRR ALEKRALVTE NRRLRHALDR GDAPGGAVER CLVGQSPAMR RLRDDVASLA SAAADVLVLG ETGAGKEQVA RALHEGGRRR DKPFVAINCG AIPESMFESE IFGHEAGAFT GAGKRRIGKV EHASGGTLFL DEVESMPLAL QVKLLRVLQE RRVERLGSNA SVPVDLRVVA ATKEDLDALS EAGRFRRDLF FRLNVVTLTL PPLRERREDI PLLFERFLVQ AAVKYQRPVV EVPPSLRRSL MLADWPGNVR ELKNAAERAV LGFLSPDLAG GPEAAPGLDA LLDRVERLVI EDALKASGQR IAEAARALGL PRKTLSDRMR RLGLSAGD
|
| |