| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1203 |
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| Symbol | |
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| ID | 6314002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1287256 |
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| End bp | 1288233 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642649921 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001923910 |
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| Protein GI | 188580465 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0133764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.454228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGGCCC TCGGTGTGGC CGTCTATTTC TACTGGCTGA TCAACCTGCA TCCCTACGAG
ACCACCGACG ACGCCTTCGT GGATGCGCGC AGCTTCACGG TCGCGCCGAA GGTCGGCGGC
TACGTCGTCG CCGTGCCGGT GACCGACAAC CAGCATGTCA GGGCCGGCGA CACGCTGTTC
CAGATCGACC CGCGCGACTA TCGCGTCGCC CTCGAACAGG CCGAGGCGCA GGTTCAGGCG
GCCCAGGCCT CGATCCGTAA CGTCGATGCC CAGATCGAGG CGCAGAAGGC GCAGGTCGAG
GCGGCCAAGG CCCAGGTGGA GACGGCGCAG GCGGCGCTGA CCTTCGCCGA GGAGGATGCC
GACCGCTACC GGAAGCTCGC CGAGCGGGGT GCCGGCACGA TCCAGCAGTC GCAATCCTCG
ACCTCGACCC TGGAACAGCG CCAGGCCTCC CTGGCGAACG CGAAGGCGAA CGTGGTCGCC
GCCCAGAAGC AGATCGGCTC GCTTCAGGCT CAGCGCGCCA GCGCCGAAGC GCAACAGGCC
CAGGCGGAGG CGCAGCGCGA CCAAGCCCGG CTCAACCTCG GCTACACCAC CGTGACGGCC
GCGCAAGGCG GCCGCGTGGT GCGCCTCACC GGTGCCGTCG GCGAATACGC CCAGGCCGGC
CAGAGCCTGT CGATGTTCGT GCCCGACGAG ATCTGGGTGA CGGCGAACTA CAAGGAGACG
CAGATCACCG ACATGCGGCC GGGCCAGCCC GTCGACATCA CGATCGACGC CTACCCGAAC
CGCCGGATCA CCGGCCGGAT CGCCTCGGTG CAGCCGGGCT CCGGCACCGC CTTCAGCCTG
CTGCCGGCGC AGAACGCCAC CGGAAACTAC GTGAAGGTGA CGCAGCGCAT TCCCGTGAAG
ATCCTGGTCG ACAACTGGCC GAGCGATGTC GCGATCGGTC CCGGCATGTC GGTCGTGCCG
AGGGCCCACG TCCGGTGA
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| Protein sequence | MLALGVAVYF YWLINLHPYE TTDDAFVDAR SFTVAPKVGG YVVAVPVTDN QHVRAGDTLF
QIDPRDYRVA LEQAEAQVQA AQASIRNVDA QIEAQKAQVE AAKAQVETAQ AALTFAEEDA
DRYRKLAERG AGTIQQSQSS TSTLEQRQAS LANAKANVVA AQKQIGSLQA QRASAEAQQA
QAEAQRDQAR LNLGYTTVTA AQGGRVVRLT GAVGEYAQAG QSLSMFVPDE IWVTANYKET
QITDMRPGQP VDITIDAYPN RRITGRIASV QPGSGTAFSL LPAQNATGNY VKVTQRIPVK
ILVDNWPSDV AIGPGMSVVP RAHVR
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