| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1193 |
|---|
| Symbol | |
|---|
| ID | 6313200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1277631 |
|---|
| End bp | 1278824 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642649911 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001923900 |
|---|
| Protein GI | 188580455 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.267898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.475472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCA GCGTCACGCT TTCCGCTGCC ACGCGCCAGA ACCTGCTCTC GCTGCAGGAC
ACTTCGGCGC TGACCGCCAC CACCCAGAAC CGTCTCGCGA CGGGCCTGAA GGTCTCGTCG
GCCCTCGACA ACCCCGTCAA CTTTTTCACC GCGCAGTCCT TCAACAGCCG CTCGGGCGAC
CTCGGCGCGC TGCTCGACTC GATCTCCAAC GGCATTCAGA CGATCCAGGC CGCCAACCAG
GGCATCACCT CGATCCAGAA GCTGATCGAC TCGGCCAAAT CGACCGCCAA CCAGGCGCTG
TCGACGCAGA TCACCACGAC CGGCACCGCG GCCAACGACT TCACCGCCAC GACCAACGCC
ACCGTCACCT TCTACGTGAA CGGGGCGAGC AAGACCGCGA CCATCGCCAC CGGCGATACG
ATCGACACGG CAATCACGGC GCTGAACACG CAGGCCGGCT CGACGATGTT CTCCAAGGAC
ACGACCGGCA AGAAGATCGT GCTGAACGCC AGCGCGGCGA TCGAGTTCGC ATCGACGGCC
GGTCAGACGG CTCTCGGCTT CACCGCCGGG ACCGGCTCGG CCACGGCCAA CAAGTACGGC
GCCGGCAACG CGGCGGCGAG CAACAGCGCC AACCTGACCA TCTCCGGCGT GGAGACCCGC
AACAAGCTGG CCGAGCAGTA CAACAGCCTG CTGATCCAGA TCACGCAGCT CGCCAAGGAT
TCGAGCTTCA ACGGCGTGAA CCTGATCAGC AACGGCGATC CCTCGAACAA GCTGCACATC
GCCTTCAACG AACGCGACAC CGCCAACCTC GACGTGCAGG GGCAGGATCT GACGGCCGAC
GGCCTCGATC TCGATCCCAT CACCGGCAAT TCCGGTTCGA CGGTGAACGG CCAGGGCAAC
TTCCTGCTCG ACGCCGACAT CAAGGGCACG CTGACCAGCC TGACCGGCGC CTCGGACACC
CTGCGCACGG CAAGCTCGAC CTTCGGTTCG AACCTCTCCG TGGTGCAGAA CCGCCAGGAC
TTCACCAAGC GGCTCGTCAA CATCCTCGAT ACCGGCGCGT CGAACCTGAC CAACGCCGAC
CTCAACGAGG AGGCGGCCAA TTCCCAGGCG CTGTCGACGC GCCAGTCGCT CGGCATCTCG
GCGCTGTCGC TCGCCAACCA GGCGCAGCAG GGCATCCTCC AGCTCCTGCG CTGA
|
|---|
| Protein sequence | MSSSVTLSAA TRQNLLSLQD TSALTATTQN RLATGLKVSS ALDNPVNFFT AQSFNSRSGD
LGALLDSISN GIQTIQAANQ GITSIQKLID SAKSTANQAL STQITTTGTA ANDFTATTNA
TVTFYVNGAS KTATIATGDT IDTAITALNT QAGSTMFSKD TTGKKIVLNA SAAIEFASTA
GQTALGFTAG TGSATANKYG AGNAAASNSA NLTISGVETR NKLAEQYNSL LIQITQLAKD
SSFNGVNLIS NGDPSNKLHI AFNERDTANL DVQGQDLTAD GLDLDPITGN SGSTVNGQGN
FLLDADIKGT LTSLTGASDT LRTASSTFGS NLSVVQNRQD FTKRLVNILD TGASNLTNAD
LNEEAANSQA LSTRQSLGIS ALSLANQAQQ GILQLLR
|
|---|
| |