Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1183 |
Symbol | |
ID | 6308912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1260883 |
End bp | 1264053 |
Gene Length | 3171 bp |
Protein Length | 1056 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642649901 |
Product | heavy metal efflux pump, CzcA family |
Protein accession | YP_001923890 |
Protein GI | 188580445 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.292353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.30181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCA TCGTCGCGCT CGCGCTCCGG CAGCGCCCCC TCGTCATCCT CGCCTTCGTG CTGTTCGTGG TGGGGGGCCT GGCCGCCTTC CAGAACCTCA ACATCGAGGC CTATCCCGAC CCGACCCCGC CCATGGTCGA TGTCGTCACG CAGACCGACG GCCTCTCGGC GGAGGAGATC GAGCGCTACG TCACGATCCC GATCGAGCGC ATCACCTCGG GGATGCCGAA CCTGCGCCAA GTGCGCACGA TCTCGCTCTA CGGCCTGTCC GACGTGAAGC TGCAGTTCGG CTTCGAGTTC GACTACCTCC AGGCCGAGCA GCAGGTGCTG AACCGCCTCC AGCAGCTCGA TCCGCTGCCG GCGGGCGCCA AGCCCACCAT CTCGCCGATC AGCCCGATCG GCGAGATCTT CCGCTACAAG CTCACGGCGC CCGCCGGCTA CAGCGTGCTC GACCTGCGCA CGCTCCAGGA ATGGGTGCTG AAGAAGCGCT TCCGCGCGGT GCCGGGCGTG ATCGATGCCA TCGGCTGGGG CGGCAAGACC AAGACCATCG AGCTCTCGGT CGATCTCGAC CGGCTGATGG CCTACGGCCT GACCCTCTCG AACGTGGTCA AGACCCTCAA CGACAGCAAC CTCAATGTCG GCGGCAACCG CGTCGCCATC GGCGGCCAGT CGGCGGTGGT GCGCGCGGTC GGCCTGATCC GCGACGTGGA CGACATCAAC GGCACGGTGC TGACCCAGGT CGGCGGCGCG CCGGTGCTGG TGAAGGACAT CGCCACCGTC ACCATCGGCC ACCAGCCGCG GCTCGGCATC GCCGGGATGA ACGACGAGGA CGACATCGTC CAGGGCATCG TCCTCATGCG CCGCGGCGAG AAGAGCACGC CGTCCATCGA AGCCGTGAAG GCGGAGGTCG CCAAGATCGA GGCCGCCGGC ATCCTGCCGC CGGGGGTGAA GATCGAGCGC ATCTACGACC GCGCCGACCT GATCGCGGTG ACGACCCACA CCGTGCTGCA CAACATGGTG GTCGGCATCC TCTTGATCCT CGCGATCCAG TGGCTGTTCC TCGGCAATCT CCGCTCGGCG CTCATCGTCG TGGCGACGAT CCCCTTCGCC CTGTTCTTCG CCGTCGTCAT CCTCGTGGCG CGCGACGAAT CCGCCAACCT GCTCTCGGTC GGCGCGCTCG ATTTCGGCCT CATCGTCGAC GGCACCGTGA TCATGGTCGA GGCGATCTTC CGCCGCCTCT CGGGCCACGG CATTCCGGGC TACCCGCCGC CGGGGCTCGA CGCGAAATCC GGGCGCATCG CGCTCGCAGC CGGCGACGTC AGCCGCTCGA TCTTCTTCGC GGCGGCGATC ATCGTCACCG GCTTCCTGCC GCTGTTCACG CTCACCGGCG TCGAGGGCCA CATCTTCGGG CCGATGGCGA CGACCTACGC CTACGCCCTG CTCGGCGGCC TGATCGCCAC CTTCACGGTC ACGCCCGCGC TCGCCGCCTA CCTCCTCCCC GCCCATATCG AGGAGAAGGA GACGATCCTG GTCCGCATCC TCGATCGGCT CTACCGCCCG GCGGTGCGCG CAGCGCTCGG CGCCCGGCTC GTCACGGTGG CCTGCGTCGC GCTGATCGCC GTCGGCGTCG GCTTGGCCGC GCGCAATCTT GGCTCGGAGT TCCTGCCCAA GCTCGAGGAG GGCAACCTCT GGGTCCGCGC CACCATGCCG GCGACGATCT CGCTGCGGGA GAGCAACGGC TACGTCAACG AGATGCGCAA GATCATCGCC CAGATCCCGG AGGTCGAGCG CGTGGTCTCG CAGCACGGGC GCCCCGACGA CGGCACCGAC GCGGCCGGCT TCTTCAACGC CGAGTTCTTC GCGCCGATGA AGCCGCTGGA CCAGTGGCGC CCCGGCATCG ACAAGGAGGC GCTCACGGAG GAGATGCTGC ACAAGCTCCA GGCGGCCTTC CCCGGCGTCG ATTTCAACCT GTCGCAGTAC CTTCAGGACA ACGTCGCCGA GGCGGTCTCC GGCATCAAGG GCGAGAACTC GTTCAAGATC TTCGGGCCCG ACCTGCAGAC CCTCACCGAC ACGGCCAAGC AGGTGCAGCG GGTTCTCGCG ACGATCCACG GCGTCGAGGA TCTCGCGGTG TTCCAGTCGC TCGGCCAGCC GACGATCGAG ATCGACGTCG ATCGGGTGCG CGCCGCCCGC TACGGCCTGA CGCCGGGCGA CATCAACACC ACGGTGCGCA CGGCCATCGG CGGCGACTCG GCCGGCGACC TCTACGATCC CGGTTCCGAG CGGCACTACC CGATCATGGT GCGGCTGCAG CCGCAGTTCC GCCAGAGCAT CGAGGCGATC GCCAACCTGC GCATCGCCGG CCAGAGCCCG GCCAACGGCG CCCCCGTGCA GTTTCCCTTG AGCGCGGTAG CGCGGGTCGA GCTCGTCTCC GGCCCGGCCT ACATCTACCG CGAGGCGCAG GAGCGCTACC TGCCGGTGAA GTTCTCCGTG CGCGGACGCG ATCTCGGCAG CACCATCGAG GAGGCGCGCA CCCGCGTCGC CAACGAGGTG AAGCTGCCGC CGGGCTACCG GCTGGAGCTG GTGGGCGAGT TCAACAACAT GAAGGGCGCG ATCGCCCGCC TCTCCGTGAC CGTGCCGATC GCGGTGGGCA TCATCGCGAT CCTGCTGTTC ATGAACTTCT CGTCCGTGAT CGACTCGCTG CTGGCGCTCA GCGTGATCCC GATGGCGATG GCCGGCGGCA TCCTGGCGCT GTCGCTCACC GGCACCTCGT TCAGCGTCTC GGCGGCGATC GGCTTCATCG CGCTGCTCGG CATTGCGGTG ATGGACGGCA TCATCGTGCT TTCCTTCTAC AACGACCTAC TGGCCGCGGG CGTCGCGCGC GTGCCGGCGA TGCTGCGCAC CTGCTACACC CAGATGCGCC CGGTGGTGAT GACCTGCGTG GTGGCCGGTG TCGGGCTGCT GCCCGCAGCC TTCTCCACCG GCGTCGGCTC GCAGGTGCAG AAGCCGCTGG CGCTGGTGGT GGTGGGCGGC ATGGCGCTCG CGCCCTTCCT GATCCTGCTG GTGCTGCCGG TGCTGATCCT CACCTTCTCG CGCCGCAAGC CCGCCGTGCA TTCGGAGGCC TCGGACCGGG TCGCGGCGGC GCAGGGGCAT TCCCACGCCG GGGCGCATTG A
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Protein sequence | MNGIVALALR QRPLVILAFV LFVVGGLAAF QNLNIEAYPD PTPPMVDVVT QTDGLSAEEI ERYVTIPIER ITSGMPNLRQ VRTISLYGLS DVKLQFGFEF DYLQAEQQVL NRLQQLDPLP AGAKPTISPI SPIGEIFRYK LTAPAGYSVL DLRTLQEWVL KKRFRAVPGV IDAIGWGGKT KTIELSVDLD RLMAYGLTLS NVVKTLNDSN LNVGGNRVAI GGQSAVVRAV GLIRDVDDIN GTVLTQVGGA PVLVKDIATV TIGHQPRLGI AGMNDEDDIV QGIVLMRRGE KSTPSIEAVK AEVAKIEAAG ILPPGVKIER IYDRADLIAV TTHTVLHNMV VGILLILAIQ WLFLGNLRSA LIVVATIPFA LFFAVVILVA RDESANLLSV GALDFGLIVD GTVIMVEAIF RRLSGHGIPG YPPPGLDAKS GRIALAAGDV SRSIFFAAAI IVTGFLPLFT LTGVEGHIFG PMATTYAYAL LGGLIATFTV TPALAAYLLP AHIEEKETIL VRILDRLYRP AVRAALGARL VTVACVALIA VGVGLAARNL GSEFLPKLEE GNLWVRATMP ATISLRESNG YVNEMRKIIA QIPEVERVVS QHGRPDDGTD AAGFFNAEFF APMKPLDQWR PGIDKEALTE EMLHKLQAAF PGVDFNLSQY LQDNVAEAVS GIKGENSFKI FGPDLQTLTD TAKQVQRVLA TIHGVEDLAV FQSLGQPTIE IDVDRVRAAR YGLTPGDINT TVRTAIGGDS AGDLYDPGSE RHYPIMVRLQ PQFRQSIEAI ANLRIAGQSP ANGAPVQFPL SAVARVELVS GPAYIYREAQ ERYLPVKFSV RGRDLGSTIE EARTRVANEV KLPPGYRLEL VGEFNNMKGA IARLSVTVPI AVGIIAILLF MNFSSVIDSL LALSVIPMAM AGGILALSLT GTSFSVSAAI GFIALLGIAV MDGIIVLSFY NDLLAAGVAR VPAMLRTCYT QMRPVVMTCV VAGVGLLPAA FSTGVGSQVQ KPLALVVVGG MALAPFLILL VLPVLILTFS RRKPAVHSEA SDRVAAAQGH SHAGAH
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