| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1182 |
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| Symbol | |
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| ID | 6308911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 1259517 |
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| End bp | 1260782 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642649900 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001923889 |
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| Protein GI | 188580444 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.272919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGGG CGCACGAGGA TAATCTGACG CCGCGGACGA TGCGTCTGCG CACACAACTC
CTCGTCGCCT GCGTGCTCGG AGCGGGGGCA GCCGCCGCCC TCTGGTACGG GCGCCCGAAG
GAGGTCGATG CCGCCGTGCC GACGCCGGCC GCGGTGACCG CCGCCGCACC GAGTGCGGGG
CCGGGGCGTT TCGTGCTCAC CGACAGCCAG CTCGCCACCG TCACCACCGT GCCGGTCGAG
CAGCGCCTGT TCTACGAGGA CATCGCCACC GAGGGGAAGA TCAGCGTCGA CGAGTACCGC
GCGACACCCG TCTTCTCGCC CTATGCGGGC CGGGTCATCA CCATCTTCGC CCGCTCCGGC
GAGCAGGTCC GCCAGGGCGA CAAGCTGTTC TCGCTCCAGG CCAACGAGAT GGTCCAGGCG
CAGAACGACT TCCTCGCGGC GCTGAACGTG CTCAACAAGT CGCGCTCGCA GCTCTCCTAC
GCCACCAACA ACGAGAAGCG CCTGCACGAC CTCTACGATT CCCGCGTCAC CACGCTGAAG
GAATTGCAGA CGGCGCAGAA CGACCTCGCC ACCGCGCAGA ATGACGCCAA GACGGCGGAG
GTCGGCCTGG AGGCGGTGCG CAACCGCCTG CGCATCCTCG GCCTCAAGGA CGGGGACATG
ACCGCGCTCC AGACCAAGGG TGCGATCAAC CCCGAGACGA CGATCTACGC GCCGCTCTCC
GGCACCGTGA TCCAGCGCAA GATCGGCCCG GGCCAGTACA TCAACACCGG CGGCGGCGAT
CCGTCCTACG TCATCGGCGA TCTCGGCCGG ATCTGGATCG TGGCGCAGTT GCGCGAGACC
GATGCGGCCA AGGTCGATCT CGGTGAGCGC ATCCGCTTCC GGACCCTCGC CTACCCGAAC
CAGACCTTCG AGAGCCGCAT CAACTACATC GGCGCCTCGG TCGATCCGGC CACCCGCCGC
ATCGTCGTGC GGGCCGAGGT CGATAATTCC AAGGGCCTCC TCAAGCCCGA GATGTATGCC
AGCGTCCACA TCATCAACGA GCGCGAGACC GTCTCCCGCG CCGTGCCGCG GCAGGCGGTG
ATCTTCGAGG GCGACAAGGC GCGGGTCTGG GTGCTCGGCG CCGGCAACAC CGTGGAGAGC
CGCCCGGTCA AGACGGGCTT CCTCGACGGC AACGACATCG AGGTCACGGA AGGCCTGTCG
GTCGGCGAGC GGGTGATCTC GAAGGGCGCC CTGTTCATCG ACGGCATGAC CGACCAGCCG
GGCTGA
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| Protein sequence | MGGAHEDNLT PRTMRLRTQL LVACVLGAGA AAALWYGRPK EVDAAVPTPA AVTAAAPSAG
PGRFVLTDSQ LATVTTVPVE QRLFYEDIAT EGKISVDEYR ATPVFSPYAG RVITIFARSG
EQVRQGDKLF SLQANEMVQA QNDFLAALNV LNKSRSQLSY ATNNEKRLHD LYDSRVTTLK
ELQTAQNDLA TAQNDAKTAE VGLEAVRNRL RILGLKDGDM TALQTKGAIN PETTIYAPLS
GTVIQRKIGP GQYINTGGGD PSYVIGDLGR IWIVAQLRET DAAKVDLGER IRFRTLAYPN
QTFESRINYI GASVDPATRR IVVRAEVDNS KGLLKPEMYA SVHIINERET VSRAVPRQAV
IFEGDKARVW VLGAGNTVES RPVKTGFLDG NDIEVTEGLS VGERVISKGA LFIDGMTDQP
G
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