Gene Mpop_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1118 
Symbol 
ID6313795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1190345 
End bp1191271 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content74% 
IMG OID642649837 
Productinner-membrane translocator 
Protein accessionYP_001923826 
Protein GI188580381 
COG category[R] General function prediction only 
COG ID[COG1079] Uncharacterized ABC-type transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0685582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCG ACATCGTCCA GATGGTGCTC GTCACGGTGC TGACGGCGGC CACCCCGCTG 
ATCCTGGCCG GTATCGGCGA ACTCGTCGTC GAGCGCGCCG GCGTGCTCAA TCTCGGCGTC
GAAGGCATGA TGGTGCTTGG CGCGGCCGCC GGCTTCGCCG TCGCCTCCCA GACCGGATCG
ACCGCGCTCG GCGCCCTCGG CGGGGCCGGC GCGGGTCTGC TGCTCGCCGC CTTGTTCGGC
ATCCTCACGG TGGGTCTGGC GGCGAACCAA GTCGCCTCGG GACTGGCGCT GACGATCCTC
GGGCTGGGGC TCTCCGGCCT CGTCGGCGCC GGCTATGTCG GGATGAAGCG CGATCCCGCC
CCTCATCTCC ACCTGCCCGG CCTCACCGAC CTGCCCGGGA TCGGCCGGCT GCTGTTCGGG
CACGACGCCT TCGTCTACGC GGCCCTCCTC CTCGTCGCGG GGGTGTGGTG GTTCCTCTGG
CGCACCCGCG CCGGATTGAC CCTGCGCGCC ATCGGCGACG ATCACACCGC GACCCACGCC
CTCGGGCTCA AGGTGCGCAA GGTCCGCTTC CTCGCCGTGC TGTTCGGCGG CGCCTGCGCG
GGGCTGGCCG GGGCCTACCT GTCGCTGGCC TACACGCCGT TCTGGGCGCC GGCGATGACC
GCCGGACGGG GCTGGATCGC GCTCGCGCTC GTGGTCTTCG CCTCCTGGCA GCCGCTCCGA
GTGGCCGCGG GGGCACTGCT CTTCGGCGGG GCGACCGTGC TCCAGCTCCA CGCCCAGGCC
GCGGGTCTCG GCCTGCCGGG CCAGCTGCTC TCGGCGGTGC CCTACCTCGC GACCATCCTG
GCCCTCGTCC TGCTGTCGCT CGGCCGGCGC CGGGGCGGCT CGCTGGCACC GGCGGCGCTC
GGCCGCGTCT TTGCTCCAAG CCGCTGA
 
Protein sequence
MTLDIVQMVL VTVLTAATPL ILAGIGELVV ERAGVLNLGV EGMMVLGAAA GFAVASQTGS 
TALGALGGAG AGLLLAALFG ILTVGLAANQ VASGLALTIL GLGLSGLVGA GYVGMKRDPA
PHLHLPGLTD LPGIGRLLFG HDAFVYAALL LVAGVWWFLW RTRAGLTLRA IGDDHTATHA
LGLKVRKVRF LAVLFGGACA GLAGAYLSLA YTPFWAPAMT AGRGWIALAL VVFASWQPLR
VAAGALLFGG ATVLQLHAQA AGLGLPGQLL SAVPYLATIL ALVLLSLGRR RGGSLAPAAL
GRVFAPSR