Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1092 |
Symbol | |
ID | 6313844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1165224 |
End bp | 1166129 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642649813 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001923802 |
Protein GI | 188580357 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0509948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0429857 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCATC ATCGGCTGCT GGGCTACCTC GACGAGGTGG CTCGCAGCGG CTCCATCCGT CGGGCGGCGA CGCGCCTGAA CGTCGCGTCG AGTGCCGTGA ACCGCCAGAT CCTCTCGCTC GAGGAGGAGA TGGGCACGCC GCTGTTCGAG CGGCTGCCGC GGGGCCTGCG CCTCACCGCG GCGGGCGAGG TGCTGGTGCG GCACGTGCGC GACACGCTGA ACGGCCACGA GCGCATGCTG GCGCAGGTCG CCTCGCTCAA GGGCCTGACC CGCGGCGAGG TGACGGTGGC GACGATGGCG AGCATCGCCG CCGGGGTGCT GCCGGGGGTG ATCGGCACCT TCCGCGAGAC CCATCCCCGC ATCGTCGTCA AGGTTCTGGT CCTGCCGGTC GATCAGATCG CCGCCGCCCT GCTCGCGGGC GAGGCCGACC TCGCCTTGGC CTATCGGCTC CCGCCCGACC CGCGCATGCG CTGCATCGCC GAGTTCGAGC ACCGGCTCGG CGCGGTGATG GCGCCCGACC ATCCCCTCAA CGGCCGCTAT CAGGTGCGGA TGGCCGACTG TCTCGAATAT CCCCTCGTCG TCGCCGACCA CTCGATGACC CTGCGCGACG TGCTCGAACT CCTCGTGCCC GAGGGCACGA GCTTCACCCC CGTGGTCGAG ACGAACTCGA TCGAGCTGAT GAAGCGCCTC GCCCAGACGG CCCCGCACAT CACCTTCGTC AACCTCTCGG ATGTCGGCGA GGAGATCCGC CGCGGCCTCC TCGCCTTCAC GCCCCTGTCC GACGCCAGCG CGATCATCCA GCGGGCGTCG CTGATGCAGC GCGCCCGCTC AGCCCTCGAC GGGCCCGCCC ACCTCCTCGC CGCGCGGATC CAGGCCGAGT TCGAGCGCCA GAGCGTTCCG GACTGA
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Protein sequence | MLHHRLLGYL DEVARSGSIR RAATRLNVAS SAVNRQILSL EEEMGTPLFE RLPRGLRLTA AGEVLVRHVR DTLNGHERML AQVASLKGLT RGEVTVATMA SIAAGVLPGV IGTFRETHPR IVVKVLVLPV DQIAAALLAG EADLALAYRL PPDPRMRCIA EFEHRLGAVM APDHPLNGRY QVRMADCLEY PLVVADHSMT LRDVLELLVP EGTSFTPVVE TNSIELMKRL AQTAPHITFV NLSDVGEEIR RGLLAFTPLS DASAIIQRAS LMQRARSALD GPAHLLAARI QAEFERQSVP D
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