| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1088 |
|---|
| Symbol | |
|---|
| ID | 6313840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1161691 |
|---|
| End bp | 1162614 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642649809 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_001923798 |
|---|
| Protein GI | 188580353 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0130625 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGGAC CGGGGACGCC GACACTCGAC CAGCTCCGGG TATTCCTCAC CGTGGTCGAG
ACCGGCAGCT TCGCCGCGGC CGGGCGCCGG CTCAACCGCG CCACCTCCGT CATCAGCTAC
ACGATCGCCA ATCTGGAGCT TCAGCTTGGA TTGGCTCTGT TCGATCGCGA GGCGACGCGC
CGGCCCCAGC TCACCGAAGG CGGCCGGGCC GTGCTGGCGG AGGCCCGCAC CGTCTCCCAC
GGCATCGACA CGCTGCGGGC CAAGGTGAGC GGCCTGCTCG GCGGACTGGA GGCCGAACTG
GGCTTCGTGT CGAGCGTGCT GATGCCCGGC GACCGGCTCG TCGATGCGCT CACCGCGTTC
CAGTCCACCT TCCCGACCGT CACCCTGCGC CTCAATGTCG AGGCGCTCGG CGCGGCCCAG
CAACTCATCA CGGATGGCCG GGCCGATCTC GGGATCGCCG TGGAGTTGTG GACCCGCGAC
AGCGACCCGC TCGAACTGAT CTCCGTGGGC GAGGTCGAGA TGCTGCCCGT CGCCGCGCCG
AACCATCCGC TTGCCGGGGC GGACGGTCTG GTGCCGGGGG CGGCGCGCGA GCATGTCCAG
CTCGTCATCA CCGACCGCTC GCCGCTGTCG CAGGACCAGG AGTTCGGCGT GGTCGCCAAC
CGCACGTGGC GGCTGTCGGA CCTCAGCACC AAGCACACCC TGCTGCTCGC CGGCATCGGC
TGGGGCAGCA TGCCCGCGCA CATGGTCGAG GCGGACATCG CCGCCGGCCG CCTCGTCGAG
CTGAGCCTGC CCGAGGTCCG GCGCCGCCGG CTGCCGCTCA CGATGATCTA CCGCACCGAC
CATCCCCCGG GACCGGCCGG GCGCTGGCTG ATCCGCCGCT TCGTCGAGCA GGCGGAGCGC
GAGGCCGCGG CGCGGGCGGC CTGA
|
|---|
| Protein sequence | MQGPGTPTLD QLRVFLTVVE TGSFAAAGRR LNRATSVISY TIANLELQLG LALFDREATR
RPQLTEGGRA VLAEARTVSH GIDTLRAKVS GLLGGLEAEL GFVSSVLMPG DRLVDALTAF
QSTFPTVTLR LNVEALGAAQ QLITDGRADL GIAVELWTRD SDPLELISVG EVEMLPVAAP
NHPLAGADGL VPGAAREHVQ LVITDRSPLS QDQEFGVVAN RTWRLSDLST KHTLLLAGIG
WGSMPAHMVE ADIAAGRLVE LSLPEVRRRR LPLTMIYRTD HPPGPAGRWL IRRFVEQAER
EAAARAA
|
|---|
| |