| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1086 |
|---|
| Symbol | |
|---|
| ID | 6313838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1157521 |
|---|
| End bp | 1160307 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642649807 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_001923796 |
|---|
| Protein GI | 188580351 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.737801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0137287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCTCA CCGTCAACGG GCAGGTCCAG GAGGCCGCAC CGCGGCCCGG CCAGTGCCTG
CGCACGCTGC TGCGGGATCT CGGCTGGTTC GGGGTCAAGA AGGGCTGCGA TGCGGGCGAT
TGCGGCGCCT GTACCGTCCA TCTCGACGGT GAACCGGTCC ATTCCTGCCT CATGCCCGCC
TTCCTCGCGG AAGGGCGCGG CATCACGACG ATCGAGGGCC TCGCCGGTCC CTGCGCGCCG
GGCGACGCGG CGCCCGAACA CCTCCACCCG ACGCAGGACG CGTTCTGCGT CGCACAGGGA
TTCCAGTGCG GCTTCTGCAC CCCGGGCATG ATCATGACGG CCGCCGCCCT CGACCAGGGC
CAGCAGCAGG ATCTCGGCAC GGCGCTCAAG GGCAATCTCT GCCGCTGCAC CGGCTACCGG
GCGATCCGCG ATGCCGTGGC CGGCCGCGCG CATGTCGATG CGGATATCGA TGCGGGCGGC
GAGGGTGGCC CGGTCGGCCG CAGCCTGCCG GCCCCGGCGA GCCGAGCCGT CGTCTCCGGC
CGGGCCGCCT TCACCTTCGA CACTGCCGTG CCGGGTCTGC TGCACCTGAA GGTGCTGCGG
GCCCCCCACG CCCATGCCCG CATCCGCGGC ATCGACCGGG CGGCGGCGTT GGCCGTGCCC
GGCGTGATCG CGGTGCTCAC GCACGAGGAC GCGCCGCGCC GCCGCTTCTC GACCGGGCGG
CACGAGAACC CCCTGGACGA CGCCGCCGAC ACGGCCGTCC TCGATTCCGT GATCCGCTTC
CACGGCCAGC GCGTCGCGGC GGTGGTCGCC GAGAGCGCGG CGGCGGCCGC CGCGGGCGTG
CGCGCGCTGC GCGTCGCCTA CGACGTACGG CCCGCCGTGT TCGACCCGGA GGCGGCTTTG
CACCCGGACG CGCCCCTGGT GCACGATCCG GCCGACCGCG ATCCGCCGCA TCCCGGCGAG
GATGCGCCGC CGCTCCTCGC GCATCCGAAC CTCGCGGCCG AGGCGCACGG GGCGATCGGC
GATGTGGAGG AAGGGTTCGG CCAAGCCGAC CGGATCCACG AGGCGGAGTA CGTCTCGCAG
CGGGTGCAGC ACGTGCATCT CGAAACGCAC GGCGCGCTCG GCTGGCTCGA CGCGGAGGGT
CGGCTGACGC TGCGCTCCTC GACGCAGGTG CCCTTCCTGA CCCGCGACGC CCTGTGCCGC
CTGTTCGATC TCGACCGGGA CCGGGTGCGC GTGCTCTGCG GCCGGGTCGG CGGCGGCTTC
GGCGGCAAGC AGGAGATGCT GACCGAGGAT CTCGTGGCGC TCGCCGTGCT GCGGACCGGC
CGCCCGGTCT CCTACGAGAT GACCCGCGAG GAGAATTTTT CCGCGGCGAC GACGCGCCAT
CCGATGCGGG TGCGGGTGAA AGTCGGCGCG CGGGCCGACG GTCGCCTCAC CGCGCTCTCG
CTCAAGGTGC TCTCGAACAC CGGCGCCTAT GGCAACCATG CCGGCGGCGT GCTGCACCAC
GGCTGCAACG AGAGCATCGC CGCCTATGCC TGCCCGAACA AGCGGGTGGA GGGCTACGCC
GTCTACACCC ACACCCTGCC GGCCGGCGCC TTTCGCGGGT ACGGCCTGAG CCAGACGATC
TTCGCCGTGG AATCGGCGCT GGACGAACTC GCGCGCGATC TCGGCATCGA CCCGTTCGCG
ATGCGCCGCC TCAACGCGGT GCGGCCCGGC GACCCGATGG TGTCGACGAG CCTGGAGCCG
CACGACGTCG TCTACGGCTC CTACGGGCTC GACCAGTGCC TCGACCGCGC CCAGGCCGCC
CTGACGGACG GCCGCGGCGC GGCGGCGCCG GGGCCGGACT GGTGCGTCGG CGAGGGCATG
GCCATGGCCA TGATCGACAC GATCCCGCCG CGCGGCCACG TCGCCCATGC CCGCATCCGC
CTCGAACCGG ACGGGACCTA TGCCCTCGCG GTTGGCACCG CCGAGTTCGG CAACGGCACC
AGCACCGTGC ACGGGCAGAT CGCCGCCGAG GTGCTCGGCA CCACACCCGA GCGCATCCGC
CTGATCCAGG CCGACACCGA TGCCGTCAGC CACGATACCG GCGCCTACGG CAGCACCGGC
ACCGTGGTCG CGGGCCAAGC GAATTTCCGC GCGGCCACGG CGCTGGCGGA CGAGCTTCGC
GCGGCCGCCG CCGCGCGGAC CGGCGCCGCA CCCGCCGATT GCCGCCTCAC CGGGAACGGC
GTCGAGACAC CCGCCGGATT CGTCGCCCTG ACCGCGCTGG CCGAGAGTTC GACCTTCGAA
GCCGCGGGCG AGGCGGACGG GACGCCGCGC TCGGTCGCCT TCAACGTCCA GGCGTTTCGC
GTGGCCGTCC ATCCGCAGAC CGGAGAGATC CGCATCCTCA GGAGCGTCCA GGCGGCGGAT
GCCGGCCGGG TCATCAACCC GATCCAGTGC CGCGGGCAGA TCGAGGGCGG GGTGGCGCAG
GCGCTCGGCG CCGCCCTCTA CGAGGATTAC CGCTTCGACG AGGCGGGTGC GGTCGTCACG
CGCACCTTGC GCAACTACCA CATCCCGGCG ATGGCCGACG TGCCGGTGAC CGAGGTTCTG
TTCGCCGACA CCTACGACAC GGTCGGGCCG CTGGGTGCCA AATCGATGAG CGAGGCGCCC
TACAACCCCG TCGCCGCCGC CTTGGCCAAC GCGATCCGCG ACGCCACCGG CGTGCGGCTG
ACCGCGACGC CGTTCGCCCC CGACCGGATT TTTCGGAAGG TCATGGCCGC GCAGAAGAGC
AAGGAACGGG AAGCGGTGGA CGCATGA
|
|---|
| Protein sequence | MRLTVNGQVQ EAAPRPGQCL RTLLRDLGWF GVKKGCDAGD CGACTVHLDG EPVHSCLMPA
FLAEGRGITT IEGLAGPCAP GDAAPEHLHP TQDAFCVAQG FQCGFCTPGM IMTAAALDQG
QQQDLGTALK GNLCRCTGYR AIRDAVAGRA HVDADIDAGG EGGPVGRSLP APASRAVVSG
RAAFTFDTAV PGLLHLKVLR APHAHARIRG IDRAAALAVP GVIAVLTHED APRRRFSTGR
HENPLDDAAD TAVLDSVIRF HGQRVAAVVA ESAAAAAAGV RALRVAYDVR PAVFDPEAAL
HPDAPLVHDP ADRDPPHPGE DAPPLLAHPN LAAEAHGAIG DVEEGFGQAD RIHEAEYVSQ
RVQHVHLETH GALGWLDAEG RLTLRSSTQV PFLTRDALCR LFDLDRDRVR VLCGRVGGGF
GGKQEMLTED LVALAVLRTG RPVSYEMTRE ENFSAATTRH PMRVRVKVGA RADGRLTALS
LKVLSNTGAY GNHAGGVLHH GCNESIAAYA CPNKRVEGYA VYTHTLPAGA FRGYGLSQTI
FAVESALDEL ARDLGIDPFA MRRLNAVRPG DPMVSTSLEP HDVVYGSYGL DQCLDRAQAA
LTDGRGAAAP GPDWCVGEGM AMAMIDTIPP RGHVAHARIR LEPDGTYALA VGTAEFGNGT
STVHGQIAAE VLGTTPERIR LIQADTDAVS HDTGAYGSTG TVVAGQANFR AATALADELR
AAAAARTGAA PADCRLTGNG VETPAGFVAL TALAESSTFE AAGEADGTPR SVAFNVQAFR
VAVHPQTGEI RILRSVQAAD AGRVINPIQC RGQIEGGVAQ ALGAALYEDY RFDEAGAVVT
RTLRNYHIPA MADVPVTEVL FADTYDTVGP LGAKSMSEAP YNPVAAALAN AIRDATGVRL
TATPFAPDRI FRKVMAAQKS KEREAVDA
|
|---|
| |