| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1084 |
|---|
| Symbol | |
|---|
| ID | 6312813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1155563 |
|---|
| End bp | 1156567 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642649805 |
|---|
| Product | NMT1/THI5 like domain protein |
|---|
| Protein accession | YP_001923794 |
|---|
| Protein GI | 188580349 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00229881 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0195344 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGGA AAACGGTAAG CGCGCTCCTC TGTGCGGGGG CGGCCCTGCT CGGGCTCGCC
GTGGGCGGAG CGCGGGCGGC GGAGCGGGTC ACGCTCCAGC TCAAATGGGT GCCGCAGGCA
CAGTTTGCCG GCTACTACGT CGCGCAGGCC AAGGGCTACT ACAAGGAGGC CGGGCTCGAC
GTGACGATCA AGCCGGGCGG ACCCGACGTG GCCCCGCCCC AGGTCATCGC GGGCGGCGGC
GCCGATGTCG TCGTCGACTG GATGCCCTCG GCGCTGGCCT CGCGCGAGAA GGGCGTGCCG
CTCGTCAACA TCGCGCAGCC CTTCAAGAAA TCCGGCCTGA TGCTGACCTG CCGGGCCGAT
ACCGGCATCA AGACGCCCGC CGACCTGAAG GGCCGGACGC TCGGGGTCTG GTACGCCGGC
AACGAGTATC CGTTCCTGGC CTGGATGGCC AAGCTCGGCC TCAAGACCGA CGGTTCGCCC
GGCGGCGTGA CCGTGCTGAA GCAGGGCTTC AACGTCGATC CCTTGATCCA GCGCCAAGCC
GACTGCGTCT CGACCATGAG CTACAACGAG TACTGGCAGG TGATCGATGC CGGCTTCAAG
CCGGAACAGC TCGTCGTCTT CCGCTACGAG GACCAGGGCG TCGCAGCCCT TGAGGACGGG
CTCTACGCCC TCGAACCGAA GCTGAAGGAC AAGGCCTTCG TCGCCCGGCT GGCGAAGTTC
GTGGCGGCCT CCGAGAAGGG CTGGGCCTAT GCCGCCGCCC ATCCGGACGA GGCGGCCGAG
ATCGTGCTGG AGAACGACGC CAGCGGTGCC CAGACCGAAA AGCACCAGAA GCGGATGATG
CGCGAGATCG CCAAGCTGCT CGACACGTCC GGCGGCCGGC TCGACCCCGC CGATTACGAC
CGCACGGTCG CGATCCTGCT CGCCGGCGGC ACGGACCAGC CCGTCATCAC CCGCAAGCCC
GAGGGGGCCT GGACCCATGC GGTGACGGCG GCCGAGGGGC AGTAG
|
|---|
| Protein sequence | MAGKTVSALL CAGAALLGLA VGGARAAERV TLQLKWVPQA QFAGYYVAQA KGYYKEAGLD
VTIKPGGPDV APPQVIAGGG ADVVVDWMPS ALASREKGVP LVNIAQPFKK SGLMLTCRAD
TGIKTPADLK GRTLGVWYAG NEYPFLAWMA KLGLKTDGSP GGVTVLKQGF NVDPLIQRQA
DCVSTMSYNE YWQVIDAGFK PEQLVVFRYE DQGVAALEDG LYALEPKLKD KAFVARLAKF
VAASEKGWAY AAAHPDEAAE IVLENDASGA QTEKHQKRMM REIAKLLDTS GGRLDPADYD
RTVAILLAGG TDQPVITRKP EGAWTHAVTA AEGQ
|
|---|
| |