Gene Mpop_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1071 
Symbol 
ID6309137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1144770 
End bp1146020 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content71% 
IMG OID642649792 
Productprotein of unknown function DUF989 
Protein accessionYP_001923781 
Protein GI188580336 
COG category[S] Function unknown 
COG ID[COG3748] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.276689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0064959 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGGAGAGCT TCGTCTGGGA ATGGGGGAGC CTGCTGCTGC GCTGGCTCCA CATCGTGGCG 
GCGATGGCCT GGATCGGCTC GTCGTTCTTC TTCATGCATC TCGACGCATC GCTGAAGCGC
ACGCCGGACA TCCCGGCCGG CGCGGGCGCC GCGGCCTGGC AGGTGCATGG CGGCGGCTTC
TACGAGATGC GCAAGTATTT CGTCGCGCCG GAGCATCTCT CCCCGGACCT CACCTGGCAC
AAGTGGCAGG CCTACACGAC GTGGCTGTCG GGCTTCGTGC TGCTGGCCTG GATCTACTAC
GCGCAGTCGC AGCTCTACCT CGTCGATCCG GCGGTGATGG ACCTGTCGGC CCCCGCCGCG
GCGGCGCTCG GCATCGGCGC CCTGGCCCTC GGCTGGCTGG TCTACGACCG CATCTGCCGC
TCAAGGCTCG GAGCGAGCGA GACCGGCCTC GCGGCGGTCG GCCTGCTGGT CATCACGCTC
GCCGCCTTCG GCTTCTCGCA GGTGTTCAGC GGCCGCGGCG CGCTGATCCA TACCGGCGCC
CTGATGGCGA CCTGGATGGC CGGCAACGTC TTCTTCATCA TCATCCCGAA CCAGCGCAAG
GTCGTCGCCG CGCTGCTGAA GGGAGAGCGG CCGGACCCGA GCCTCGGCCA ACAGGCCAAG
CAGCGCTCGG CGCAGAACAA CTACCTGACG CTGCCGGTCG TCCTGATGAT GATCGCCAAC
CACTACCCGA TTCTGTTCGC CTCGCAGGCG ACGATCCCGC TCATCGTCGC GCTCGTCACC
GCCTCGGGTG CGGTGATCCG CTACTTCTAC AACGTGCGCC ATGCCGACCA TGCCCGCTCG
CCCTGGTGGG CCTGGGCCGC GGCCTCGGCG GGGCTGGCCG CCGCCTTCGT TCTCGCGGTG
GCCGGAAGCG CCGGGGGCCG CTCGGTGCTG GGCCTGCCGC CGCAGGCCGA AGGCCCGCCG
GCCGCCGCCC TGGCCTCGGC CGGTCCGGGG GGCGCCGCGC CGCCGGACCA CGTCGTCGAA
CTCGTCGCAG GGCGCTGCGC CATGTGCCAT GCGGCCGAGC CGGTCTGGGA CGGGATCGGC
GTGGCGCCGA AGGGCGTTCG TCTCGACACC GCCGAGGCCA TCGGCCGTCA GGCCGAGGCG
ATCCGGCGGC AGGTCGTGCT GACGCACAAC ATGCCGCCCA ACAACGTCAC CGAGATGACC
GATGAGGAGC GCGGCGTGAT CGCGGCTTGG CTCGCGGACG CCGCGCGCTG A
 
Protein sequence
MESFVWEWGS LLLRWLHIVA AMAWIGSSFF FMHLDASLKR TPDIPAGAGA AAWQVHGGGF 
YEMRKYFVAP EHLSPDLTWH KWQAYTTWLS GFVLLAWIYY AQSQLYLVDP AVMDLSAPAA
AALGIGALAL GWLVYDRICR SRLGASETGL AAVGLLVITL AAFGFSQVFS GRGALIHTGA
LMATWMAGNV FFIIIPNQRK VVAALLKGER PDPSLGQQAK QRSAQNNYLT LPVVLMMIAN
HYPILFASQA TIPLIVALVT ASGAVIRYFY NVRHADHARS PWWAWAAASA GLAAAFVLAV
AGSAGGRSVL GLPPQAEGPP AAALASAGPG GAAPPDHVVE LVAGRCAMCH AAEPVWDGIG
VAPKGVRLDT AEAIGRQAEA IRRQVVLTHN MPPNNVTEMT DEERGVIAAW LADAAR