| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1071 |
|---|
| Symbol | |
|---|
| ID | 6309137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1144770 |
|---|
| End bp | 1146020 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649792 |
|---|
| Product | protein of unknown function DUF989 |
|---|
| Protein accession | YP_001923781 |
|---|
| Protein GI | 188580336 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3748] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.276689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0064959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAGCT TCGTCTGGGA ATGGGGGAGC CTGCTGCTGC GCTGGCTCCA CATCGTGGCG
GCGATGGCCT GGATCGGCTC GTCGTTCTTC TTCATGCATC TCGACGCATC GCTGAAGCGC
ACGCCGGACA TCCCGGCCGG CGCGGGCGCC GCGGCCTGGC AGGTGCATGG CGGCGGCTTC
TACGAGATGC GCAAGTATTT CGTCGCGCCG GAGCATCTCT CCCCGGACCT CACCTGGCAC
AAGTGGCAGG CCTACACGAC GTGGCTGTCG GGCTTCGTGC TGCTGGCCTG GATCTACTAC
GCGCAGTCGC AGCTCTACCT CGTCGATCCG GCGGTGATGG ACCTGTCGGC CCCCGCCGCG
GCGGCGCTCG GCATCGGCGC CCTGGCCCTC GGCTGGCTGG TCTACGACCG CATCTGCCGC
TCAAGGCTCG GAGCGAGCGA GACCGGCCTC GCGGCGGTCG GCCTGCTGGT CATCACGCTC
GCCGCCTTCG GCTTCTCGCA GGTGTTCAGC GGCCGCGGCG CGCTGATCCA TACCGGCGCC
CTGATGGCGA CCTGGATGGC CGGCAACGTC TTCTTCATCA TCATCCCGAA CCAGCGCAAG
GTCGTCGCCG CGCTGCTGAA GGGAGAGCGG CCGGACCCGA GCCTCGGCCA ACAGGCCAAG
CAGCGCTCGG CGCAGAACAA CTACCTGACG CTGCCGGTCG TCCTGATGAT GATCGCCAAC
CACTACCCGA TTCTGTTCGC CTCGCAGGCG ACGATCCCGC TCATCGTCGC GCTCGTCACC
GCCTCGGGTG CGGTGATCCG CTACTTCTAC AACGTGCGCC ATGCCGACCA TGCCCGCTCG
CCCTGGTGGG CCTGGGCCGC GGCCTCGGCG GGGCTGGCCG CCGCCTTCGT TCTCGCGGTG
GCCGGAAGCG CCGGGGGCCG CTCGGTGCTG GGCCTGCCGC CGCAGGCCGA AGGCCCGCCG
GCCGCCGCCC TGGCCTCGGC CGGTCCGGGG GGCGCCGCGC CGCCGGACCA CGTCGTCGAA
CTCGTCGCAG GGCGCTGCGC CATGTGCCAT GCGGCCGAGC CGGTCTGGGA CGGGATCGGC
GTGGCGCCGA AGGGCGTTCG TCTCGACACC GCCGAGGCCA TCGGCCGTCA GGCCGAGGCG
ATCCGGCGGC AGGTCGTGCT GACGCACAAC ATGCCGCCCA ACAACGTCAC CGAGATGACC
GATGAGGAGC GCGGCGTGAT CGCGGCTTGG CTCGCGGACG CCGCGCGCTG A
|
|---|
| Protein sequence | MESFVWEWGS LLLRWLHIVA AMAWIGSSFF FMHLDASLKR TPDIPAGAGA AAWQVHGGGF
YEMRKYFVAP EHLSPDLTWH KWQAYTTWLS GFVLLAWIYY AQSQLYLVDP AVMDLSAPAA
AALGIGALAL GWLVYDRICR SRLGASETGL AAVGLLVITL AAFGFSQVFS GRGALIHTGA
LMATWMAGNV FFIIIPNQRK VVAALLKGER PDPSLGQQAK QRSAQNNYLT LPVVLMMIAN
HYPILFASQA TIPLIVALVT ASGAVIRYFY NVRHADHARS PWWAWAAASA GLAAAFVLAV
AGSAGGRSVL GLPPQAEGPP AAALASAGPG GAAPPDHVVE LVAGRCAMCH AAEPVWDGIG
VAPKGVRLDT AEAIGRQAEA IRRQVVLTHN MPPNNVTEMT DEERGVIAAW LADAAR
|
|---|
| |