Gene Mpop_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1070 
Symbol 
ID6309136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1143680 
End bp1144612 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID642649791 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001923780 
Protein GI188580335 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.651506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00634214 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCTGTCCC TGGAGAGTAT CCGCATCTTC ATGCGCGCGG CGGAGACCGG CAGCTTCTCG 
GCGGCCGGCC GCTCCCTGCG CCTGTCGCCC TCGGTGATCA GCTACCGCAT CCAGACGCTG
GAGCAGCATC TCGGCTGCCT GCTGCTCACC CGCACGACGC GGCGAATGAA CCTGACGGAG
GCCGGCCGCG TCTTCTACGA CCGCTGCCTC GACATCGCCG CCTCCGTGGA GCGCGCGGAG
AAGAGCGTCG AGACCGAGGG CGCCGCGCCG CGCGGGACGC TGAAGGTCAC CGCTCCGCTG
ACGCTCGGCC GGCGCGTCGT GGCGCCGCTG ATCCCCGCCT TCCGCGAGCG CCACCCGGAG
GCGGACGTCC ACCTTCGGCT CTCCGATCAT CTGCTCGACC TCGTGCAGGA GGCCGTCGAC
GTGGCGGTCC GCCTCGCGCA GATGCGCGAC TCGAGCTTCA CCCTGCGCAA GATCGCCGAT
ATCGAGCGGA TCCTGTGCGC CTCTCCGGCC TACCTCGCCG AGCATCCCGC CCCCGAGAGC
CCGGCCGAGC TCATCGATCA TGCCTGCCTG CTGCTGCGCT TTCCCGGATC CGAGCAGTTC
CGCTGGAGCG TGCGCGACGG CGACGAGGTC GTGACGCTGC CGGTCTCCGG CCCCATCGAC
GCGGATGACG GCGACGTGCT GACCGAATGG GCACTCCAGG GGCTGGGCAT CGTCCTCAAG
CCCGTCTTCG AGGTGGCGCC CCATCTCGCC GACGGCCGCC TCGTGCCGGT CCTGCCGGGT
ACGCCGCCCA CGCCCGTGAC CCTCGGCGTC GTCTACCCAT CGCGAAAGAT GCTGCCCAGC
CGCGCCAAGA CCTTCATCGA GATGACGACG GAGGCCCTGC GCGCCCATGT CGGCGCCCAA
CTCGACCTGA TCGGCCGGCG CCCGGCGCGG TAG
 
Protein sequence
MLSLESIRIF MRAAETGSFS AAGRSLRLSP SVISYRIQTL EQHLGCLLLT RTTRRMNLTE 
AGRVFYDRCL DIAASVERAE KSVETEGAAP RGTLKVTAPL TLGRRVVAPL IPAFRERHPE
ADVHLRLSDH LLDLVQEAVD VAVRLAQMRD SSFTLRKIAD IERILCASPA YLAEHPAPES
PAELIDHACL LLRFPGSEQF RWSVRDGDEV VTLPVSGPID ADDGDVLTEW ALQGLGIVLK
PVFEVAPHLA DGRLVPVLPG TPPTPVTLGV VYPSRKMLPS RAKTFIEMTT EALRAHVGAQ
LDLIGRRPAR