Gene Mpop_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_1064 
Symbol 
ID6314131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1129038 
End bp1130156 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID642649785 
Productbeta-lactamase domain protein 
Protein accessionYP_001923774 
Protein GI188580329 
COG category[R] General function prediction only 
COG ID[COG1237] Metal-dependent hydrolases of the beta-lactamase superfamily II 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.393014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0622516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGG CTCTCGACAG GCGCGGGTTT CTGAAACTGT CGGCGGCGCT CGCCGCCGGT 
TCGGCCGCCG GCTTCTCCTG CATTGAGGTG GCGCGCGCCG CGCCCGTCGC GGTTCCGACC
GTCGATACCT TGAGCCTGCG GGTGCTGATC GATTCCGCGC ACGATCAGTT TCTGAAGCCG
GCGACCGTGC AGGGCGTGCT GCACCAGCCG CCGGGCAACG GCCGCGGCGC CGATTACCGC
AAGGTGCTGC ACAACCAGTG GGGCCTCTCG CTCTTCGCCG AGTCCAAGGC CGGCGAGGAG
GCGCGCACCA TCCTGCTCGA TTTCGGCTAC AGCCCCGAAG CGCTGCTCAA CAATATCGAG
ATCCTCAAGG TCGATCCGAC CAAGATCGAT GCGTTGATCG TCAGCCACGG CCATCACGAC
CATTACGGCG GGCTGACCGG CTTCCTCGAC AAGTACCGCG ACGCGCTCTC CCCGGAGCTG
AAGCTCTACG CGGGCGGCGA GGACAATTTC TGCCATCGCC TGTCCCCGAG CGGGGTGCAG
GGCCAGTTCA CCGATTTCGG CCAGCTCGAC CGGCGTGAAC TGACCGCGCG GCGGATCGCC
ACCGTCCTGT GCGAGGCGCC GACGGTGGTG GCCGGCCACG CCTTCACCAC CGGCCAGATC
AAGCGCACCT CCGCCGAACG CATCCTGCCC AACACCTTCG TCGAACGGGG CATCAAGGAC
GGGCTCGGCT GCGACGCGAG CCACTATTCG CCCGCCGAAC TCCAGGGCAA GATCATCCCC
GACGAGCATG TCCACGAGCA CGCCACCTGC TTCAACGTGC GGGGCAAGGG CCTCGTGGTG
ATCTCGTCCT GCGGTCATGT CGGCATCGTC AACTCGGTGC GGCAGGCGCA GGCGGTGTCG
GGGATCGAGA AGGTCCACGC CATCGTCGGC GGCTTCCATC TCGGGCCGGC GCCGAAAGAG
TATCTGACCG AGGTCGTCGG CGAGATCGGC CGGCTGAAGC CCGACGTCGT GATCCCGATG
CATTGCAGCG GCCTCAACTT CGCCCTGGAG GCGCAGCGGC AGATGCCGGA GAACGTCATC
GTCCCGACCA CCGGAAGCCG GCTCACCTTC GGTGCGTAG
 
Protein sequence
MTEALDRRGF LKLSAALAAG SAAGFSCIEV ARAAPVAVPT VDTLSLRVLI DSAHDQFLKP 
ATVQGVLHQP PGNGRGADYR KVLHNQWGLS LFAESKAGEE ARTILLDFGY SPEALLNNIE
ILKVDPTKID ALIVSHGHHD HYGGLTGFLD KYRDALSPEL KLYAGGEDNF CHRLSPSGVQ
GQFTDFGQLD RRELTARRIA TVLCEAPTVV AGHAFTTGQI KRTSAERILP NTFVERGIKD
GLGCDASHYS PAELQGKIIP DEHVHEHATC FNVRGKGLVV ISSCGHVGIV NSVRQAQAVS
GIEKVHAIVG GFHLGPAPKE YLTEVVGEIG RLKPDVVIPM HCSGLNFALE AQRQMPENVI
VPTTGSRLTF GA