| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1046 |
|---|
| Symbol | |
|---|
| ID | 6312963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 1114027 |
|---|
| End bp | 1114665 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642649767 |
|---|
| Product | maleylacetoacetate isomerase |
|---|
| Protein accession | YP_001923756 |
|---|
| Protein GI | 188580311 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.483712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCT ACGGTTACTG GCGATCGACC TCGTCCTACC GGCTGCGCCT CGCGCTCGCC
CTCAAGGGGC TGGCGTTCGA CCAAGTGCCG GTACACCTCG TTCGCGGCGG AGGCGAGCAC
CGCAGCGATG CCTACCGGCG GATCAATCCG CAGCAGCGCG TGCCGAGCCT GATCCTCGAC
GACGGCACCG TTCTGACCCA GTCGCCGGCC ATCATCGAAT ATCTCGAAGA GACGTTCCCG
TTGCCGCCGC TGCTGCCGGC CGATCCGATC CAGCGCGCGC GCATCAGAGC CGTCGCGGCC
ATCATCGGCT GCGACATCCA TCCGCTCCAC AACGTCGGCC CGCTCACCCA CCTGCGAGAG
CGCTTCGGCG CCTCGGAGGA CGAGATCGGC CGCTGGGTCG GTCGCTGGAT CGGCGAGGGC
CTCTCCGCCG TCGAAGCCCT GATCGAGGAC GGCCACACCT ACTGCTTCGG CCCCTGGCCA
AGCTTGGCCG ATGTCTACCT CGTCCCGCAG GTCTACGCGG CCCGGCGGTT CGGAAGCGCG
CTTGCCTCGC TCCCGAGGAT CACGCGCATC GTCGATTATG CCGAGGCCCA GCCGCTGTTC
CGGGCTGCGC ACCCATCCCG CCAGCCCGAC GCCACCTGA
|
|---|
| Protein sequence | MKLYGYWRST SSYRLRLALA LKGLAFDQVP VHLVRGGGEH RSDAYRRINP QQRVPSLILD
DGTVLTQSPA IIEYLEETFP LPPLLPADPI QRARIRAVAA IIGCDIHPLH NVGPLTHLRE
RFGASEDEIG RWVGRWIGEG LSAVEALIED GHTYCFGPWP SLADVYLVPQ VYAARRFGSA
LASLPRITRI VDYAEAQPLF RAAHPSRQPD AT
|
|---|
| |