| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1039 |
|---|
| Symbol | |
|---|
| ID | 6313223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1107530 |
|---|
| End bp | 1108198 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642649761 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_001923750 |
|---|
| Protein GI | 188580305 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.232578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TGCTGGTCGA AGACGACGAG GCGCTCTCCG CCGAGCTGGC CAAGGCGCTG
CGCGCGGAGG GCTTCGCCAT CGATCTGGCC CGAAACGGCA TCGACGCCGG GCATCTCGGC
GAGACCGAGA CCTACGACGC GGTCGTGCTC GATCTCGGCC TGCCCCAGCG AGACGGTGTC
TCGGTGCTAC AGGATTGGCG ATCGGCCGGG CGCACCGTGC CGGTTCTGAT CCTCACCGCG
CGCGATGGCT GGAGCGACAA GGTCGCGGGC TTCAAGGCGG GGGCCGACGA CTACCTCGTG
AAGCCGTTCC GCGTGGAGGA ACTGGTGATG CGTCTGCGGG CCCTGATGCG CCGTGCCCAG
GCCAACGGCG CCGCGCGGGT CGCATGCGGA CCGCTCACCT TCGACGCGGG GCTCGGCACC
TTCGAGCATC ACGGATTGCC GCTGCGGCTG ACGGGGCTCG AATGGCGCGT GCTGTGCGCC
CTCATCCTGC GCAGGGAGGC CGTGGTGCCG CGGGGACAGT TGATCGAGCG GGTCTATGAC
GGCGATGCCG AGGTCGATTC CAACTCCGTC GAAGTCATCA TCACCCGCCT GCGCCGCAAG
ATCGCCCCCG CCGCCATCGA GACCGTGCGT GGCCACGGCT ACCGGCTGAT GCCGGCGGGC
GCCGCGTGA
|
|---|
| Protein sequence | MKILLVEDDE ALSAELAKAL RAEGFAIDLA RNGIDAGHLG ETETYDAVVL DLGLPQRDGV
SVLQDWRSAG RTVPVLILTA RDGWSDKVAG FKAGADDYLV KPFRVEELVM RLRALMRRAQ
ANGAARVACG PLTFDAGLGT FEHHGLPLRL TGLEWRVLCA LILRREAVVP RGQLIERVYD
GDAEVDSNSV EVIITRLRRK IAPAAIETVR GHGYRLMPAG AA
|
|---|
| |