Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_1022 |
Symbol | |
ID | 6309406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 1086638 |
End bp | 1090111 |
Gene Length | 3474 bp |
Protein Length | 1157 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642649744 |
Product | carbamoyl-phosphate synthase, large subunit |
Protein accession | YP_001923733 |
Protein GI | 188580288 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAAC GCACCGACAT CTCCTCCATC CTCATCATCG GTGCGGGCCC CATCATCATC GGGCAGGCCT GCGAATTCGA TTACTCCGGC ACCCAGGCCT GCAAGGCCCT GCGGGAAGAG GGCTACCGGA TCGTCCTGGT GAACTCGAAC CCGGCGACGA TCATGACCGA TCCGGACATG GCCGACGCCA CCTATGTCGA GCCGATCACG CCGGAGGTCG TGGCCAAGAT CATCGAGAAG GAGCGGCCCG ATGCGCTGCT CCCGACCATG GGCGGCCAGA CCGCGCTCAA CTGCGCGCTC TCGCTCAAGC GCATGGGCGT GCTCGAAAAG TTCGGCGTGC AGATGATCGG CGCGACGGCG GAAGCCATCG ACAAGGCCGA GGATCGCAAC CTCTTCCGCG ACGCGATGAC CAAGATCGGC CTGGAAACGC CGAAATCGGA ACTCGCCAAC GCCTCCGCCG CCAAGAAGGC CGACCGCGAC CGCTATCTCG CCGAGAAGGC CCGCATCGAG TCGGCGCAGT CCGACCCGGC CGCCCGCGAG GCGGCGCTCG CCGAGTTCGA GCGGCAGTGG AGCGGCGGCG AGGGTGACCG CCGCCGCCGT TACATCGAGC ATGCGCTGGG CCAAGCGCTG ATCGCGCTGG CCGAAGTCGG CCTGCCGGCG ATCATCCGCC CGTCCTTCAC CATGGGCGGC ACCGGCGGCG GCATCGCCTA TAACCGCGAG GAATTCCTCG AAATCGTCGA GCGCGGCATC GACGCCTCGC CGACCAACGA GGTGCTGATC GAGGAGAGTG TGCTCGGCTG GAAGGAGTAC GAGATGGAGG TCGTCCGCGA TAAGGCGGAC AACTGCATCA TCGTCTGCTC CATCGAGAAC GTCGATCCGA TGGGCGTCCA CACCGGCGAT TCGATCACCG TCGCCCCGGC GCTGACGCTC ACCGACAAAG AGTATCAGGT GATGCGCGAC GCCTCGCTGG CGGTTCTGCG CGAGATCGGC GTCGAGACGG GCGGTTCCAA CGTCCAGTTC GCGATCAACC CCGAGAATGG GCGGATGATC GTGATCGAGA TGAACCCGCG CGTCTCGCGC TCCTCGGCGC TGGCCTCGAA GGCGACCGGC TTCCCCATCG CCAAGGTCGC GGCCAAGCTC GCCGTCGGCT ACACGCTGGA CGAGATCGCC AATGACATCA CCGGCGGCGC GACCCCGGCC TCGTTCGAGC CGACGATCGA CTACGTCGTC ACCAAGATCC CGCGCTTCGC CTTCGAAAAG TTCCCCGGCG CCGAGCCGAC GCTGACCACC GCGATGAAGT CGGTGGGCGA GGCGATGGCG ATCGGCCGCT GCTTCGCGGA ATCCCTGCAG AAGGCCCTGC GCTCGCTGGA GACGGGGCTG ACCGGCCTCG ACGAGATCGA GATCGAGGGG CTGGGCAAGG GCGACGATCA CAACGCGATC AAGGCCGCGC TCGGCACGCC GACGCCGGAC CGGCTGCTCA AGGTGGCCCA GGCCATGCGC CTCGGGATCA GCCACGAGGA GATCCACGCC TCCTGCAAGA TCGATCCGTG GTTCCTGGAG CAGCTCCAGG CCATCGTCGA TCTGGAGAAC CGGGTGAAGG CGCACGGCCT GCCGACGACG CCGGGTGCCT TCCGCCAGCT CAAGGCGGCC GGCTTTTCCG ACGCGCGACT GGCTGTGCTG ACGGATACCG ACGAGGACGC CGTGCGCGTC GCCCGCCGGG CCCTCGGGGT GCGGCCGGTC TTCAAACGGA TCGACACCTG CGCCGCCGAG TTCAAGGCGC CGACCGCCTA CATGTACTCG ACCTACGTCG CCCCCTTCGC CGGCCAGACG GCCGATGAGG CGTACCCGTC GGACAAGAAG AAGATCATCA TCCTCGGCGG CGGCCCGAAC CGGATCGGGC AGGGCATCGA GTTCGACTAT TGCTGCTGCC ACGCCTGCTT CGCGCTGACC GAAGCCGGCT ACGAGACCAT CATGGTCAAC TGCAACCCGG AGACGGTCTC GACCGACTAC GACACCTCCG ACCGGCTCTA TTTCGAGCCG CTGACGGCCG AGGACGTGCT GGAGATCGTC GAGACGGAGC GGCAGTCGGG CCAGCTCCAC GGCGTCATCG TGCAGTTCGG CGGCCAGACC CCGCTCAAGC TCGCCCGGGC GCTCGAAGGC GCGGGCGTGC CGATCCTCGG CACCTCGCCG GACGCGATCG ACCTCGCCGA GGACCGCGAC CAGTTCAAGC GGCTCCTCGA CAAGCTCGGC CTCAAGCAGC CGAAGAACGG TATCGCCTTC TCGGTGGAGC AGAGCCGGCT GGTGGCGGCC GAACTCGGCC TGCCCTTCGT CGTGCGCCCG AGCTACGTGC TGGGCGGGCG CGCCATGGCG ATCATCCGCG ACGAGGCGCA GTTCACCGAG TACCTGCTCG GCACCCTGCC GAGCCTGATC CCGTCCGATA TCAAGGCGCG CTACCCCAAC GACAAGACGG GGCAGATCAA CACGGTGCTG GGCAAGAACC CGCTCCTGTT CGACCGCTAC CTGTCGGACG CGACCGAGGT CGATGTCGAT GCGGTCTGCG ACGGCGAGAG CGTCTTCATC GCCGGCATCA TGGAGCATAT CGAGGAGGCG GGCATCCACT CGGGCGATTC CGCCTGCTCG CTGCCGCCGC GCACCCTGTC GCCGGAACTC CTCGCCGAGC TGGAGCGCCA GACCAAGGCG ATGGCTTTGG CCCTCAAGGT CGGCGGCCTG ATGAACGTGC AATACGCGAT CAAGGACGGC ACGATCTACG TGCTGGAGGT GAACCCGCGC GCCTCGCGCA CGGTGCCCTT CGTCGCCAAG GTGATCGGCG AGCCGATCGC CAAGATCGCC GCGCGGATCA TGGCCGGCGA GCGCCTCGAC GCTTTCAGCC TCAAGCCCAA GCAGCTCGAC CACATCGCGG TGAAGGAGGC GGTGTTCCCC TTCGCCCGCT TCCCCGGCGT CGACGTCCTG CTCGGGCCGG AGATGCGCTC GACCGGCGAG GTGATCGGCC TCGATGCCGG CTTCGGCGTG GCCTTCGCCA AGAGCCAGCT CGGTTCCGGC ACGGCGGTGC CGCGCACCGG CACGGTGTTC GTCTCCGTGC GCGACGACGA CAAGCCCCGC GTGCTGCCGA CGATCCGGCT GCTCTCGGAT CTCGGCTTCA CCATCCTCGC GACCGGCGGC ACGCAGCGCT ACCTCGCGGA CGAGGGCATC CCGACCCAGC GCATCAACAA GGTGCTGGAG GGCCGTCCCC ACATCGTCGA TTCGATCAAG AACGGCGACA TCGCCCTCGT GATCAACACG ACGGAAGGGG CCGGCGCGCT CTCCGACTCG CGCTCGCTGC GCCGGGCGGC CCTCTTGCAT AAAGTGCCGT ACTACACCAC TCTCGCCGGC GCGATGGCGG CGGCCGAGGG GATCAAGGCC TATCTCGAAG GCGATCTCCG GGTGCGTGCC TTGCAGGAAT ACTTCGCGGC CTAA
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Protein sequence | MPKRTDISSI LIIGAGPIII GQACEFDYSG TQACKALREE GYRIVLVNSN PATIMTDPDM ADATYVEPIT PEVVAKIIEK ERPDALLPTM GGQTALNCAL SLKRMGVLEK FGVQMIGATA EAIDKAEDRN LFRDAMTKIG LETPKSELAN ASAAKKADRD RYLAEKARIE SAQSDPAARE AALAEFERQW SGGEGDRRRR YIEHALGQAL IALAEVGLPA IIRPSFTMGG TGGGIAYNRE EFLEIVERGI DASPTNEVLI EESVLGWKEY EMEVVRDKAD NCIIVCSIEN VDPMGVHTGD SITVAPALTL TDKEYQVMRD ASLAVLREIG VETGGSNVQF AINPENGRMI VIEMNPRVSR SSALASKATG FPIAKVAAKL AVGYTLDEIA NDITGGATPA SFEPTIDYVV TKIPRFAFEK FPGAEPTLTT AMKSVGEAMA IGRCFAESLQ KALRSLETGL TGLDEIEIEG LGKGDDHNAI KAALGTPTPD RLLKVAQAMR LGISHEEIHA SCKIDPWFLE QLQAIVDLEN RVKAHGLPTT PGAFRQLKAA GFSDARLAVL TDTDEDAVRV ARRALGVRPV FKRIDTCAAE FKAPTAYMYS TYVAPFAGQT ADEAYPSDKK KIIILGGGPN RIGQGIEFDY CCCHACFALT EAGYETIMVN CNPETVSTDY DTSDRLYFEP LTAEDVLEIV ETERQSGQLH GVIVQFGGQT PLKLARALEG AGVPILGTSP DAIDLAEDRD QFKRLLDKLG LKQPKNGIAF SVEQSRLVAA ELGLPFVVRP SYVLGGRAMA IIRDEAQFTE YLLGTLPSLI PSDIKARYPN DKTGQINTVL GKNPLLFDRY LSDATEVDVD AVCDGESVFI AGIMEHIEEA GIHSGDSACS LPPRTLSPEL LAELERQTKA MALALKVGGL MNVQYAIKDG TIYVLEVNPR ASRTVPFVAK VIGEPIAKIA ARIMAGERLD AFSLKPKQLD HIAVKEAVFP FARFPGVDVL LGPEMRSTGE VIGLDAGFGV AFAKSQLGSG TAVPRTGTVF VSVRDDDKPR VLPTIRLLSD LGFTILATGG TQRYLADEGI PTQRINKVLE GRPHIVDSIK NGDIALVINT TEGAGALSDS RSLRRAALLH KVPYYTTLAG AMAAAEGIKA YLEGDLRVRA LQEYFAA
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