| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1008 |
|---|
| Symbol | |
|---|
| ID | 6309261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 1072134 |
|---|
| End bp | 1074251 |
|---|
| Gene Length | 2118 bp |
|---|
| Protein Length | 705 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642649729 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_001923719 |
|---|
| Protein GI | 188580274 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.280031 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.222128 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCACG CGATCGTCTT TTTCCCGCTG ATCGGCGCCC TGATCGCCGG CCTGTTCGGC
CGGCTGATCG GCGCACGGAT GAGCGAGCTC GTGACGACGG GCTGCCTCGC CTTCGCGGCC
CTGCTGTCCT GGGGCGCCTT CTTCCTCGTG ACCGGCGACG GCCGCGCCGA GACGGTGCCC
GTCGCGCAGT GGTTCTCGGC CGGCGACCTC GTGGTCGACT GGGCCTTCAA GGTCGACACG
CTGACCGCCG TGATGCTCGT CGTTGTGACT TCGGTCTCGA CGCTCGTGCA CCTCTACTCC
ATCGGCTACA TGCACGAGGA TCCGCACCGG CCGCGCTTCT TCGCCTACCT GTCGCTGTTC
ACCTTCGCCA TGCTGATGCT GGTGACGGCC GACAACCTCG TGCAGATGTT CTTCGGCTGG
GAGGGCGTCG GCCTGGCTTC CTACCTGCTG ATCGGCTTCT GGTACGAGAA GCCCTCGGCC
AATGCCGCGG CGATGAAGGC CTTCATCGTC AACCGCGTCG GCGATTTCGG CTTCTCGCTC
GGCATCTTCC TCGTCTTCGT CCTCACCGGT TCGGTCGGCT TCGAGGCGAT CTTCGCCAAG
GCCCCGGAGC TGAAGGACGC GACCTTCTAC TTCCTCGGCC ATGACTGGCA CGCTCTGACG
CTCGCCTGTC TGCTGCTGTT CATGGGCGCC ATGGGCAAGT CGGCGCAGTT CCTGCTGCAC
ACCTGGCTCC CCGACGCCAT GGAAGGCCCG ACCCCGGTTT CGGCGCTGAT CCACGCCGCC
ACCATGGTGA CCGCCGGCGT GTTCATGGTC GCGCGCCTGT CGCCGCTCTT CGAGCTGGCC
CCCACCGCGC TCACCGTCGT CACGGTCATC GGCGGCATCA CCGCCTTCTT CGCGGCGACC
GTCGGCCTCG TGCAGAACGA CATCAAGCGG GTCATCGCCT ACTCGACCTG CTCGCAGCTC
GGCTACATGT TCGTCGGCCT CGGCGTCGGC GCCTACGCCA CCGGCGTGTT CCACCTGTTC
ACCCACGCCT TCTTCAAGGC GCTGCTGTTC CTCGGCGCCG GCTCGGTCAT CCATGCGATG
CACCACGAGC AGGACATGCG GAACATGGGG GGCTTACGCC GCTACATCCC CTTCACCACG
GCGATGATGA CGATCGGCAC GATCGCGCTG ATCGGCTTCC CCTTCACCTC CGGCTACTAC
TCCAAGGACG CGATCATCGA GGCGGCCTAC ATGTCCGACC GCCCCGGCCA CGTTCTGGCG
TTCCTCGCCA CCGTGATCGC CGCGCTGATG ACCTCGTTCT ATTCCTGGCG CCTGTTCTTC
CTCACCTTCG AGGGACCTCA GCGCTGGGTG GCCCACGGCG CCCACGGTCA CGACGATCAC
GCGCATGACC ATGCCCATGC CGCGACCGCG CACACCGCCT CGTCCCACCA AGCCGATGGC
GCACCGGGGC ATCACGAGGG CGTCGCTCAC GACGACAAGG GCCACGACGT CGAGCCCGCC
TCGCACAGCG CGATCGAGCA CCACGACGAC CACGCCCACA CGCCGCACGA GAGCCCGCTC
GTGATGACGA TCCCGCTCGC GATCCTGGCC TTCGGCGCCC TGTTCGCCGG CCTGATCTTC
AAGGAGCGGT TCATCGGGCA CGACATGGAC AAGTTCTGGG GCCACGCGCT CCCGCACGGG
TCCGGCAACG ACATCATGCA CAAGATCCAC GACGCGCCGG GCTGGGTCGC CGCCTCGCCC
TTCGTGATGC TCGTGCTCGG CTTCCTCCTG GCCTTCTGGA TGTACATCCG CCGGCCCGAC
ATGCCGCACC GCCTCGCGGA GTCTCAGCCG ATCCTGTACC GCTTCCTGCT CAACAAGTGG
TACTTCGACG AGATCTACGA CCGGATCTTC GTGCGGCCGG CGAAGAACTT CGGCCTGTTC
CTCTGGAAGG AGGGTGACGG CCGCATCATC GACGGCTTCG GTCCCAACGG CATCTCGGCC
CGGGTCGTGG ACATCACCCG TGGCGTGGTC CGCCTCCAGA CCGGCTACGT CTATCACTAC
GCCTTCGTGA TGCTCGTCGG GGTCGCCGGC CTGATCACGT GGTACCTCGT CTCCGGCGTG
CCTGGGGGGA CCCACTGA
|
|---|
| Protein sequence | MYHAIVFFPL IGALIAGLFG RLIGARMSEL VTTGCLAFAA LLSWGAFFLV TGDGRAETVP
VAQWFSAGDL VVDWAFKVDT LTAVMLVVVT SVSTLVHLYS IGYMHEDPHR PRFFAYLSLF
TFAMLMLVTA DNLVQMFFGW EGVGLASYLL IGFWYEKPSA NAAAMKAFIV NRVGDFGFSL
GIFLVFVLTG SVGFEAIFAK APELKDATFY FLGHDWHALT LACLLLFMGA MGKSAQFLLH
TWLPDAMEGP TPVSALIHAA TMVTAGVFMV ARLSPLFELA PTALTVVTVI GGITAFFAAT
VGLVQNDIKR VIAYSTCSQL GYMFVGLGVG AYATGVFHLF THAFFKALLF LGAGSVIHAM
HHEQDMRNMG GLRRYIPFTT AMMTIGTIAL IGFPFTSGYY SKDAIIEAAY MSDRPGHVLA
FLATVIAALM TSFYSWRLFF LTFEGPQRWV AHGAHGHDDH AHDHAHAATA HTASSHQADG
APGHHEGVAH DDKGHDVEPA SHSAIEHHDD HAHTPHESPL VMTIPLAILA FGALFAGLIF
KERFIGHDMD KFWGHALPHG SGNDIMHKIH DAPGWVAASP FVMLVLGFLL AFWMYIRRPD
MPHRLAESQP ILYRFLLNKW YFDEIYDRIF VRPAKNFGLF LWKEGDGRII DGFGPNGISA
RVVDITRGVV RLQTGYVYHY AFVMLVGVAG LITWYLVSGV PGGTH
|
|---|
| |