| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_1003 |
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| Symbol | |
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| ID | 6309704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 1066111 |
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| End bp | 1066515 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642649724 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_001923714 |
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| Protein GI | 188580269 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0862504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.205859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGGAC GGCTCAACCA CGTCGCCATC GCGGTGAAGG ATCTCGACGC GGCGACCGCA
ATCTACCGCG ACACGCTGGG CGCCAAGGTG ACCGAGCCGC TGCCGCAGCC GGAGCACGGC
GTGACGGTGG TGTTCGTGGA ACTGCCCAAC AGCAAGGTCG AGCTGATGTC GCCCCTGGGC
GAGAACTCGA CCATCCAGGG CTTCGTCGAC AAGAATCCGG CCGGCGGCAT CCACCACGTC
TGCTACGAGG TCGAGGACAT CATCGCCGCC CGCGACAAGA TGAAGGCGGC CGGCGCCCGC
GTGCTCGGCA CCGGCGAGCC GAAGATCGGC GCCCATGGCA AGCCGGTGAT CTTCCTCCAC
CCCAAGGACT TCCTCGGGAC GCTGGTGGAG CTGGAGCAGG TCTGA
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| Protein sequence | MIGRLNHVAI AVKDLDAATA IYRDTLGAKV TEPLPQPEHG VTVVFVELPN SKVELMSPLG
ENSTIQGFVD KNPAGGIHHV CYEVEDIIAA RDKMKAAGAR VLGTGEPKIG AHGKPVIFLH
PKDFLGTLVE LEQV
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