Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0999 |
Symbol | |
ID | 6309700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1061781 |
End bp | 1062491 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 642649720 |
Product | ABC transporter related |
Protein accession | YP_001923710 |
Protein GI | 188580265 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.115476 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGA CGAATGCCGG CGGCGCCCAG CCCGTGCCGG CCCTGTTCTT CGCGGGCGTC CAACGCCGCT ACGCGCAGGC CGATGGCGCG CTCGAGATCC TGCGCGGCAC CGATCTGGCG ATCTGGCCGG GCGAGCTGGT CGCCCTGGTG GCGCCCTCGG GCGCCGGCAA ATCGACCCTG CTCCACGTCG CCGGCCTTCT GGAGCGCCCG GACGGCGGCG AGGTCTATAT CGGCGGCCAG CCGACCGCCG GCATGTCGGA TGCCGAGCGC ACCCGCCTGC GGCGCGAGGA GATGGGCTTC GTCTACCAGT TCCACCACCT GCTGCCGGAG TTCTCGGCGC TGGAGAACGT GGTGCTGCCC CAGCTCATCC GCGGACTCGC CCGCCGGGAG GCGGAGGCGC GCGCCGCCGA ACTCCTGAGC TTCCTCGGCC TCAAGGACCG CCTGCCGCAC CGCCCGGCCG AACTCTCCGG CGGCGAGCAG CAGCGCGTCG CCATCGCCCG TGCGGTGGCC AATGGCCCGC GCCTGCTGCT CGCCGACGAG CCCACCGGCA ACCTCGACCC GCAGACCGCG GGCCGGGTTT TCAGCATCCT GCTCCAACTC GTGCGCGCCT CCGGCCTCGC GGCCCTGATC GCGACCCACA ACATGGAGCT TGCCGCGCGC ATGGACCGCC GGGTGACGAT CCGCGACGGG ATGATCGAGC AGTTGGCTTA G
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Protein sequence | MAQTNAGGAQ PVPALFFAGV QRRYAQADGA LEILRGTDLA IWPGELVALV APSGAGKSTL LHVAGLLERP DGGEVYIGGQ PTAGMSDAER TRLRREEMGF VYQFHHLLPE FSALENVVLP QLIRGLARRE AEARAAELLS FLGLKDRLPH RPAELSGGEQ QRVAIARAVA NGPRLLLADE PTGNLDPQTA GRVFSILLQL VRASGLAALI ATHNMELAAR MDRRVTIRDG MIEQLA
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