Gene Mpop_0999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0999 
Symbol 
ID6309700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1061781 
End bp1062491 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content73% 
IMG OID642649720 
ProductABC transporter related 
Protein accessionYP_001923710 
Protein GI188580265 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.115476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGA CGAATGCCGG CGGCGCCCAG CCCGTGCCGG CCCTGTTCTT CGCGGGCGTC 
CAACGCCGCT ACGCGCAGGC CGATGGCGCG CTCGAGATCC TGCGCGGCAC CGATCTGGCG
ATCTGGCCGG GCGAGCTGGT CGCCCTGGTG GCGCCCTCGG GCGCCGGCAA ATCGACCCTG
CTCCACGTCG CCGGCCTTCT GGAGCGCCCG GACGGCGGCG AGGTCTATAT CGGCGGCCAG
CCGACCGCCG GCATGTCGGA TGCCGAGCGC ACCCGCCTGC GGCGCGAGGA GATGGGCTTC
GTCTACCAGT TCCACCACCT GCTGCCGGAG TTCTCGGCGC TGGAGAACGT GGTGCTGCCC
CAGCTCATCC GCGGACTCGC CCGCCGGGAG GCGGAGGCGC GCGCCGCCGA ACTCCTGAGC
TTCCTCGGCC TCAAGGACCG CCTGCCGCAC CGCCCGGCCG AACTCTCCGG CGGCGAGCAG
CAGCGCGTCG CCATCGCCCG TGCGGTGGCC AATGGCCCGC GCCTGCTGCT CGCCGACGAG
CCCACCGGCA ACCTCGACCC GCAGACCGCG GGCCGGGTTT TCAGCATCCT GCTCCAACTC
GTGCGCGCCT CCGGCCTCGC GGCCCTGATC GCGACCCACA ACATGGAGCT TGCCGCGCGC
ATGGACCGCC GGGTGACGAT CCGCGACGGG ATGATCGAGC AGTTGGCTTA G
 
Protein sequence
MAQTNAGGAQ PVPALFFAGV QRRYAQADGA LEILRGTDLA IWPGELVALV APSGAGKSTL 
LHVAGLLERP DGGEVYIGGQ PTAGMSDAER TRLRREEMGF VYQFHHLLPE FSALENVVLP
QLIRGLARRE AEARAAELLS FLGLKDRLPH RPAELSGGEQ QRVAIARAVA NGPRLLLADE
PTGNLDPQTA GRVFSILLQL VRASGLAALI ATHNMELAAR MDRRVTIRDG MIEQLA