Gene Mpop_0994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0994 
Symbol 
ID6309543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1056110 
End bp1056895 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID642649716 
Producthypothetical protein 
Protein accessionYP_001923706 
Protein GI188580261 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.817106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAC ACGGTTTGAG AATGATCGCG GCCGCCGCCC TGGTGGGGCT GGCCGGCACG 
GCGCAGGCGG CGCAGTGCGG CAACACCGCC GCCGGCTTCG AGGCGTGGAA GGACGAGTTC
GCCGCCGAGG CCAAGGGCCG TGCGAGCCCG GCGGCGCTCG CCGCGCTCGC CAACACCTCC
TACTCCACGG CGACGATCTC GGCGGATCGC GGTCAGAAGA GCTTCAAGCT CTCGCTCGAC
CAGTTCCTGG CCAAGCGCGG CGGCAACACC ATCGTCTCCC GCGGACGCGC GCTCAAGGCG
CAGAACGCGG CGCTCTTCGC CTCGATCGAG CAGCGCTACG GCGTGCCGCC GGGCCCGCTT
CTGGCGATCT GGGGCATGGA AACCGGCTTC GGCGCGGTGA AGGGCAACGT CAACACCCTC
TCGGCGGTGG CCACGCTCGC CTATGATTGC CGCCGCTCGG CCTACTTCAC CGACCAGCTC
TACGCCGCGC TCAAGCTCGT CGACAGCGGC GTGCTGACGC CTGCGACCCG CGGCGCCGCC
CATGGCGAGG TCGGCCACAC CCAATTCCTG CCCAAGAACG TCCTGACCTA CGGCGTCGGC
GGCAGCCTCG ACAGCGCTCC GAACGCGCTG AACTCCACCG CCAACTTCCT GAAGGGCCAC
GGCTGGCAGC GGGGCGCGGG CTACCAGCCC GGCGAGCCGA ACTTCGCCGC GATCCAGGGC
TGGAACGCCG CCGGCGTCTA TCAGCGCGCC ATCGCGCTCC TCGGCGCCCG GATCGACGGG
CAGTAA
 
Protein sequence
MTGHGLRMIA AAALVGLAGT AQAAQCGNTA AGFEAWKDEF AAEAKGRASP AALAALANTS 
YSTATISADR GQKSFKLSLD QFLAKRGGNT IVSRGRALKA QNAALFASIE QRYGVPPGPL
LAIWGMETGF GAVKGNVNTL SAVATLAYDC RRSAYFTDQL YAALKLVDSG VLTPATRGAA
HGEVGHTQFL PKNVLTYGVG GSLDSAPNAL NSTANFLKGH GWQRGAGYQP GEPNFAAIQG
WNAAGVYQRA IALLGARIDG Q