Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0979 |
Symbol | |
ID | 6312792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 1043210 |
End bp | 1043842 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642649701 |
Product | Exopolysaccharide synthesis ExoD |
Protein accession | YP_001923691 |
Protein GI | 188580246 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCTCCG CTGCGCGCAC TTCCGACGTT CTCACCTTGC TCGCGAGCCA GGAGAGCGAG CGGCTGACTG TAGGCGATAT CGTCGCCGTG CTGCGGGACC GCGCCTTCGC GCTGCTCGTG GTTCTGCTCG GCCTGCCCAA CTGCCTGCCG ATGCCGCCGC CGATCCCGCT GGTCTGCGGG CTGGTCCTGC TCGTCATCGC GATCCAGATC GTGGCCGGCA TGTCGGCGCC CTGGCTGCCG CGGCGGCTGC TCGACCAGTC GATCGCCCGC GCGACGGTGG AGAAGGCGGT CAAGCGCGCG GTGCCGCTGC TGCGCCGGCT GGAGCGCTGG TCGCGCCCGC GCCTGAGCGT GTTCGACGGC GCCCTCGGCA TGCGCGGCAT GGGCGTGCTG ATCCTGGCGC TGGCCCTGGC GCTGATCGTG GCGCCGCCCT TCTTCGGCCA GATCCCGCTC GGGCTCGCCG TCTCGCTGAT CGGCCTCGGA CTGGTGGAGC GCGACGGCTT CGTCGTGCTG ATCGGCCTCG TGATCGGCGG CATCGGCGTC GGGATCTCGA TCGGCTTCGT CTACACCCTG TTTGCCAGCA TCATGGGCGC CTTCGCGTGG CTCTCACAGG CGATCCCCGG GCTCGGGCTG TAG
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Protein sequence | MSSAARTSDV LTLLASQESE RLTVGDIVAV LRDRAFALLV VLLGLPNCLP MPPPIPLVCG LVLLVIAIQI VAGMSAPWLP RRLLDQSIAR ATVEKAVKRA VPLLRRLERW SRPRLSVFDG ALGMRGMGVL ILALALALIV APPFFGQIPL GLAVSLIGLG LVERDGFVVL IGLVIGGIGV GISIGFVYTL FASIMGAFAW LSQAIPGLGL
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