Gene Mpop_0979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0979 
Symbol 
ID6312792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp1043210 
End bp1043842 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID642649701 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_001923691 
Protein GI188580246 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCTCCG CTGCGCGCAC TTCCGACGTT CTCACCTTGC TCGCGAGCCA GGAGAGCGAG 
CGGCTGACTG TAGGCGATAT CGTCGCCGTG CTGCGGGACC GCGCCTTCGC GCTGCTCGTG
GTTCTGCTCG GCCTGCCCAA CTGCCTGCCG ATGCCGCCGC CGATCCCGCT GGTCTGCGGG
CTGGTCCTGC TCGTCATCGC GATCCAGATC GTGGCCGGCA TGTCGGCGCC CTGGCTGCCG
CGGCGGCTGC TCGACCAGTC GATCGCCCGC GCGACGGTGG AGAAGGCGGT CAAGCGCGCG
GTGCCGCTGC TGCGCCGGCT GGAGCGCTGG TCGCGCCCGC GCCTGAGCGT GTTCGACGGC
GCCCTCGGCA TGCGCGGCAT GGGCGTGCTG ATCCTGGCGC TGGCCCTGGC GCTGATCGTG
GCGCCGCCCT TCTTCGGCCA GATCCCGCTC GGGCTCGCCG TCTCGCTGAT CGGCCTCGGA
CTGGTGGAGC GCGACGGCTT CGTCGTGCTG ATCGGCCTCG TGATCGGCGG CATCGGCGTC
GGGATCTCGA TCGGCTTCGT CTACACCCTG TTTGCCAGCA TCATGGGCGC CTTCGCGTGG
CTCTCACAGG CGATCCCCGG GCTCGGGCTG TAG
 
Protein sequence
MSSAARTSDV LTLLASQESE RLTVGDIVAV LRDRAFALLV VLLGLPNCLP MPPPIPLVCG 
LVLLVIAIQI VAGMSAPWLP RRLLDQSIAR ATVEKAVKRA VPLLRRLERW SRPRLSVFDG
ALGMRGMGVL ILALALALIV APPFFGQIPL GLAVSLIGLG LVERDGFVVL IGLVIGGIGV
GISIGFVYTL FASIMGAFAW LSQAIPGLGL