| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0947 |
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| Symbol | |
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| ID | 6308872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 999587 |
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| End bp | 1000624 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642649662 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001923659 |
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| Protein GI | 188580214 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.48756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCTCCA AGGTACTCTC CACGGTGCTT TCCACGGTGC TTTCCACGGT GCTCGGCGCG
GACGAGGCGC GCAGCCACGT GCGCGATGAG GGAAGCGTCC CTGAGCGGCT CGACCGCGTT
CTCGCCCGAG CCTTCGACGA TCTCTCGCGT GCCCGGCTCC AGGCGCTGGT GCGCGACGGG
CTCGTGCAAT GCGACGGGGC GGTGGTGCGC GATCCCGCGC GCAAGGTCGG GGCCGGCAGC
CGGATCGATC TCACGGTGCC CGCGCCGCTG CCCGCCGAGC CCCTCGGCGA GGCGCTGCCG
CTCGCGGTCG TCCACGAGGA CGAGGACCTC ATCGTCATCG ACAAGCCGGC TGGCCTCGTC
GTGCATCCGG CGGCGGGGCA TGAGGACGGC ACCCTGGTGA ACCGGCTGAT CGCCCATTGC
GGCGCGAGCC TGTCCGGGAT CGGCGGGGTG CGCCGGCCCG GCATCGTCCA CCGTCTCGAC
AAGGATACGA GCGGCCTGCT CGTCGTCGCC AAGAACGATC TCGCGCATCA GGGGCTCTCG
GCGCAATTCG CCGATCACGG TCGCAGCGGG GCCCTGGAGC GGGCCTATCT CGCCCTGGTC
TGGGGCGTGC CGGAACCCCG CGCGGGCACG ATCCGGGCGA ACCTCGCACG GTCCCGCCAC
AACCGCGAGA AGATCGCCGT GGTCCGCGAC GGCGAGGGGC GCGAGGCGAT CACGCACTAC
CGGGTCGAGG CCCTTCCCGC GGCGGACGGC GTCACCGCGC TGCTGCGCTG CCGCCTCGAG
ACCGGGCGCA CCCACCAGAT CCGGGTGCAT CTGAGCCATC GCGGCCATCC GCTGCTGGGC
GACGCCGTCT ATGGCGGCGC CTTCAAGACC AAAGCGGCCC GTCTCGCGGA GCCCGCCCGC
GACGCTCTGA CGGCGCTTGC GCGGCAAGCC CTGCACGCGG CCGAACTCGG CTTTCTCCAC
CCGCGCTCCG GGGAGCGCCT GCGCTTCGAG AGCCCGCTTC CGGCGGATTT TTCGAGGCTG
CTCGCCGCCC TGGGCTAG
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| Protein sequence | MSSKVLSTVL STVLSTVLGA DEARSHVRDE GSVPERLDRV LARAFDDLSR ARLQALVRDG
LVQCDGAVVR DPARKVGAGS RIDLTVPAPL PAEPLGEALP LAVVHEDEDL IVIDKPAGLV
VHPAAGHEDG TLVNRLIAHC GASLSGIGGV RRPGIVHRLD KDTSGLLVVA KNDLAHQGLS
AQFADHGRSG ALERAYLALV WGVPEPRAGT IRANLARSRH NREKIAVVRD GEGREAITHY
RVEALPAADG VTALLRCRLE TGRTHQIRVH LSHRGHPLLG DAVYGGAFKT KAARLAEPAR
DALTALARQA LHAAELGFLH PRSGERLRFE SPLPADFSRL LAALG
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