| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0913 |
|---|
| Symbol | |
|---|
| ID | 6309042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 965187 |
|---|
| End bp | 966164 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642649629 |
|---|
| Product | cysteine synthase A |
|---|
| Protein accession | YP_001923626 |
|---|
| Protein GI | 188580181 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | [TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.282212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CCTCGACCCC GGACGTCCGG AAGCCCGGAC ACGGCCGCGT CTACGGCTCG
ATCACCGAGA CCATCGGCAA CACGCCGCTC GTGCGCCTCA ACCGGCTCAC CAAGGAGCGG
GGCGTCGATG CCGAGATCCT GCTCAAGCTC GAATTCTTCA ACCCGATCTC GTCCGTGAAG
GACCGCATCG GCGTCAACAT GATCGACGCG CTCGAAGCCT CCGGCCGGCT CAAGCCTGGT
GGGACGCTGG TCGAGCCGAC CTCGGGCAAT ACCGGCATCG CGCTGGCCTT CGTCGCCGCC
GCCCGCGGCT ACCGCCTGAT CCTCGTCATG CCGGAGACGA TGTCGCTGGA GCGGCGCAAG
ATGCTCGCCT TCCTCGGCGC GCAGCTTGAA CTGACCCCCG GCCCGCAGGG CATGAAGGGT
GCCATCGGCC GCGCCGAGGA ACTGCTGCGC GAGATCGACG GCGCGGTGAT GCCGCAGCAA
TTCTCCAACC CGGCCAACCC CGAGATCCAC CGCAAGACCA CGGCGGAAGA GATCTGGAAC
GACACGCAAG GGCAGCTCGA CGCCTTCGTG GCCGGTGTCG GCACCGGCGG CACGGTGACC
GGCGTCGGCG AGGTGCTCAA GCCCCGTCTG CCCGGCCTCA AGGTGTTCGC GGTGGAGCCG
GTGGACAGCC CCGTGATCTC CGGCGGCCAG CCCGGCCCGC ACAAGATCCA GGGCATCGGC
GCGGGCTTCA TCCCCGACAA CCTGCACACC GACATCCTCG ACGGCGTGCT CAAGGTGACG
AACCAGCAGG CGATCGACAC GGCGCGCGAC CTCGCCAAGT TCGAGGGCAT CCCCGGCGGC
ATCTCGACCG GCGGCAACGT CGCCGCGGCG CTGGAACTGG CGGGCCGCCC CGAGTTCCAG
GGCAAGCGCA TCGTCACCGT CGCCTGCTCG TTCGCCGAGC GCTACATCTC CTCGGTGCTG
TTCGAGGGCA TCGGCTAG
|
|---|
| Protein sequence | MTDTSTPDVR KPGHGRVYGS ITETIGNTPL VRLNRLTKER GVDAEILLKL EFFNPISSVK
DRIGVNMIDA LEASGRLKPG GTLVEPTSGN TGIALAFVAA ARGYRLILVM PETMSLERRK
MLAFLGAQLE LTPGPQGMKG AIGRAEELLR EIDGAVMPQQ FSNPANPEIH RKTTAEEIWN
DTQGQLDAFV AGVGTGGTVT GVGEVLKPRL PGLKVFAVEP VDSPVISGGQ PGPHKIQGIG
AGFIPDNLHT DILDGVLKVT NQQAIDTARD LAKFEGIPGG ISTGGNVAAA LELAGRPEFQ
GKRIVTVACS FAERYISSVL FEGIG
|
|---|
| |