Gene Mpop_0908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0908 
Symbol 
ID6309037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp962248 
End bp962730 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content70% 
IMG OID642649624 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_001923621 
Protein GI188580176 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.459375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.322179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGA CCCGCTACAC CGACTACGCC CTGCGGACCC TGATCTATGT CGGCCTGCGC 
GAGCCGAAGC AGAGCTCGAT CGCCGAGATC GCACGGGCCT ACGGGATCTC TGAAAGCCAC
CTCACCAAGG TGGTGCACCA ACTCGGCCGG CTCGGGCTAA TCCAGACGAT CCGGGGGCGG
GGCGGGGGCC TGCGCCTCGC CAAGCCACCG GGTGAGATCG TCGTCGGCGC CGTGGTGCGC
GAGACCGAGG ACGACCTTGC GCTGGTCGAG TGCTTCTCTG CGGGATCCTG CGCGATCACC
GCGCCCTGTC GCCTGCGGCG GGCCCTGGGC GAGGCGCTGG CGGCGTTCCT GGCGGTGCTG
GACCGCTACA CCCTGGCTGA CCTCCTCGGA GGATCGGAGG GTGACGAGAT TGCGCGCTTG
CTCGGCCTGT CGCCGCCGAC GGGCGTCGCG GCGGCGCTCG AGCCCGAGGA AAAATCGGTT
TGA
 
Protein sequence
MRLTRYTDYA LRTLIYVGLR EPKQSSIAEI ARAYGISESH LTKVVHQLGR LGLIQTIRGR 
GGGLRLAKPP GEIVVGAVVR ETEDDLALVE CFSAGSCAIT APCRLRRALG EALAAFLAVL
DRYTLADLLG GSEGDEIARL LGLSPPTGVA AALEPEEKSV