| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0904 |
|---|
| Symbol | ruvA |
|---|
| ID | 6312712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 959425 |
|---|
| End bp | 960051 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642649620 |
|---|
| Product | Holliday junction DNA helicase RuvA |
|---|
| Protein accession | YP_001923617 |
|---|
| Protein GI | 188580172 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
|---|
| TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0373691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.232261 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGCA AGCTCAAGGG GATCGTCGAT TCCTACGGAG AGGACTTCGT CATCCTCGAC
GTGAACGGCG TCGGCTACGT CGTGCACTGC TCCGCCCGCA CCCTGCAGCG CCTGCCCAAG
CCCGGCGAGG CCACGGATCT CGCCATCGAG ACGCATGTGC GCGAGGACAT GATTCGCCTC
TACGGCTTCC GCTCGGACGC CGAGCGGGAG TGGTTCCGCC TGCTCCAGAC GGTGCAGGGG
GTCGGCACCC GCGTGGCCCT CGGCGTTCTC TCCGTGCTGG AGCCGGCCCA GCTCGCCACC
GCCATCGCCA CCGGCGACAA GGGCGCCGTC GCCCGCGCCC CCGGGGTCGG CCCGCGCCTT
GCCGCCCGCC TCGTGGCGGA ACTCAAGGAC AAGGCGCCCG CCTTCGCTCC CGTCGATCCC
GCGCTCGTCG CCCTGACCGG GGCCGTCGAG GACAGGACCG CGCCGCAGCC GGTCGCCGAC
GCGATCTCGG CACTCGTCAA TCTGGGTTAT CCCCAGGTTC AGGCCTCGGC CGCCATCGCC
GCCGCCCTGA AGGGTCTGGG CGACGGTGCC GAGACCGTGG AGGCCAAGAC GCTGATCCGG
CTCGGGTTGC GGGAGCTGGC GCGGTAG
|
|---|
| Protein sequence | MIGKLKGIVD SYGEDFVILD VNGVGYVVHC SARTLQRLPK PGEATDLAIE THVREDMIRL
YGFRSDAERE WFRLLQTVQG VGTRVALGVL SVLEPAQLAT AIATGDKGAV ARAPGVGPRL
AARLVAELKD KAPAFAPVDP ALVALTGAVE DRTAPQPVAD AISALVNLGY PQVQASAAIA
AALKGLGDGA ETVEAKTLIR LGLRELAR
|
|---|
| |