| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0886 |
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| Symbol | |
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| ID | 6309920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 936234 |
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| End bp | 938291 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 642649602 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001923599 |
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| Protein GI | 188580154 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGGGA AGGCCGAACG TCAGGGAACC GCGGACCGCC GGCCGGCTTC GCGGGGCGGG
GAGGGTGGTC GGGAGACGCT GCGGGGATCG GTGGGTCGCG ACGTGCGGCG TGCGGGGCTG
GCGGTGTGCC TGATCATCGC CGGAGCCGCC GCCGTCACGC TGGCGGCCGT CTCCCTGTCC
ATGCCGGGCC TGTGGGCCGC GACCGTCCTC GCCGCCGCCG CGGCCCTTGT CCTCGTCGCC
CTCGCGCTGC TCCGGCTCGC CCGCCGCCTC GACGGAGCGA TGCGGGCCGC CGAAGACTCC
GCCGCGATGT GCGCCGAAAC GACGGCCCTG ACGGTCGCGG CCGACATCGC GGCCCTGAAG
CGCAGCGAGG CGGTGCTGAG CGAGCGCATC GCCCGGCTGA ACGCGGCGCT CGATACCCTG
TCCCTGGGCT TTCTGCTCTA CGACCGCGAT CACCGGCTGC TGGTAGTCAA CCGCCGCTAT
CACGAGATCT ACCGCCTGCC TTCGGGCGCC GTGACGCCCG GCATGTCGGC GCGGGAGGTG
CTGCGCCGGA ACGTCCAGGC CGGAAGCGAG GCGGAGCGGA GCGAGGCCGA GCAGCTCGCC
GAGATCGGCG CGCTGATGGG ATCCGGCGCC GCGCCGGCCC AGATCCAGCA TCTCCCCGAC
GGCCGCGTCG TCGCCGTCGA GATCCAGCCG ATCGACGGCG GCGGCTTCGT GGCGGTCTAC
GAGGAGGCGA CCGAACGCTG GAATGCCGAG GCCCGCATCG CCCACATGGC CCGGCACGAC
GCCGTGACCG ACCTGCCCAA TCGCGTGCTG CTGCGCGAGC GGATCGAGGG GGCGATCACC
CAGGCCCGGC GCGAGACCGG CTTCGCCATG CTCTGCCTCG ACCTCGACAA CTTCAAGCAG
GTGAACGACA CCCTTGGCCA CGCCGTCGGC GACGAGTTGC TCAGGGCGGT GGCCCACCGG
CTCAGGGCCT GTGTGCGCGA GGTCGACACC GTCGCCCGGC TCGGCGGCGA CGAGTTCGCG
ATCATCCAGG CCGCGGTCAC GACGCCGGCC GATGCCGCGA CCCTGGCCCA GCGCATCCTC
GACGTGGTGA GCGCCCCCTA CGCGCTCACC CACCATTCCG TCATCGTCGG CGTCAGCATC
GGCATCGCGC TCGCGCCCGG CGACGGGCTG GAGGCCGAGC GCCTGATGCA ATGTGCCGAC
GTCGCCCTGT ACCGCGCCAA GGGCGACGGG CGCGGCGTGT TCCGGTTCTT CGAGGCGGAG
ATGGATGCCC GGCTCCAGGC CCGGCGCTCC CTCGAACTCG ATCTGCGCGC CGCCTTCGAG
GCGGAGGCGT TCGACCTGCA CTACCAGCCG ATCTACGACC TCTCGGCGGA GCGCATCTGC
GGCTTCGAGG CGTTGCTGCG CTGGACCCAT CCGACCCGCG GCCGGGTCTC GCCCGCCGAG
TTCGTGCCGC TCGCCGAGGA AATCGGCCTC ATCGTGCCGC TGGGCGAGTG GGTGCTGCGC
CGCGCCTGCC GCGAGGCCGC CGGCTGGCCC GAGGGCCTCA AGGTCGCGGT CAACGTCTCG
GCGGCGCAGT TCACCTCGAG CGCGCTGATC GGGACGGTGA AGGCGGCGCT GGCCGAGAGC
GGCCTGCCCG CCCGCCGCCT CGAACTGGAG ATCACCGAGA GCGTGCTGCT CGTCAACGGC
AGCGCCACGG TGGCGATCCT GCACGGGCTG CGCAACCTGG GCACGCGCAT CGCCATGGAC
GATTTCGGCA CGGGCTATTC CAGCCTGAGC TACCTGCGCA GCTTCCCCTT CGACAAGATG
AAGGTCGATC AGTCCTTCAC CCGCGACCTG ACGGTGGAGC AGGGCTCCGG CTTCATCGTG
CGGGCGGTGG TCAGCCTCGC CTCCAGCCTC GGCATGACAA CCACGGCGGA AGGCGTCGAG
ACGCCGGAAC AGCTCGCCTG GCTGCGCGAG GAGGGCTGCG ACGAGGTGCA GGGCTACCTG
TTCAGCCCGC CCGTGCCGGC CTGTGCGCTG CCGGCCCTGC TCGAAACCTG GAACGGGCGG
ACGCGCCGCG CCGCGTGA
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| Protein sequence | MQGKAERQGT ADRRPASRGG EGGRETLRGS VGRDVRRAGL AVCLIIAGAA AVTLAAVSLS
MPGLWAATVL AAAAALVLVA LALLRLARRL DGAMRAAEDS AAMCAETTAL TVAADIAALK
RSEAVLSERI ARLNAALDTL SLGFLLYDRD HRLLVVNRRY HEIYRLPSGA VTPGMSAREV
LRRNVQAGSE AERSEAEQLA EIGALMGSGA APAQIQHLPD GRVVAVEIQP IDGGGFVAVY
EEATERWNAE ARIAHMARHD AVTDLPNRVL LRERIEGAIT QARRETGFAM LCLDLDNFKQ
VNDTLGHAVG DELLRAVAHR LRACVREVDT VARLGGDEFA IIQAAVTTPA DAATLAQRIL
DVVSAPYALT HHSVIVGVSI GIALAPGDGL EAERLMQCAD VALYRAKGDG RGVFRFFEAE
MDARLQARRS LELDLRAAFE AEAFDLHYQP IYDLSAERIC GFEALLRWTH PTRGRVSPAE
FVPLAEEIGL IVPLGEWVLR RACREAAGWP EGLKVAVNVS AAQFTSSALI GTVKAALAES
GLPARRLELE ITESVLLVNG SATVAILHGL RNLGTRIAMD DFGTGYSSLS YLRSFPFDKM
KVDQSFTRDL TVEQGSGFIV RAVVSLASSL GMTTTAEGVE TPEQLAWLRE EGCDEVQGYL
FSPPVPACAL PALLETWNGR TRRAA
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