| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0878 |
|---|
| Symbol | |
|---|
| ID | 6312576 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 929731 |
|---|
| End bp | 931308 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642649594 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001923591 |
|---|
| Protein GI | 188580146 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.362725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTGT TTCACTGGAT CGTCGGCGTC CTGGTCGGCG CGGTTCTTCT CGCCGCGCTG
GCGCGGCGCC TGCGCGCGCC GTACCCCGCC TTCCTGGCGC TGGGGGGCGT CGGCCTGGCC
TTCCTGCCCG GCATGCCGAG CCTCAGCCTC GATCCGGAAC TGGCGCTCGC CCTGTTCCTC
GCGCCCGTGC TGATGGATGC GGGCTACAGC ACCTCGCTGC GCGACCTCAT GCGCAATGCC
CGCCCCATCG CCGGTCTCGC CGTCGGGGCG GTGGCGGCGA CCACGGCGGC GGTCGCCGCG
GTTGCCCTCT GGCTGGTGCC GGACATGCCG CTCGCCGCCG CCATCGTGCT CGGCGCCGTC
GTTGCCCCGC CCGACGCCGT GGCGGCGCTC TCGGTGCTCG GCCACGTCTC CCTGCCGCAC
CGCCTCGCCA CGATCCTGCG CGGCGAGAGC CTCCTGAACG ACGCCGCCTC GCTGCTGATC
TACCGCCTCG GCGTGGCCGC GGCGGTGACC GGCCATTTCT CCGTCTCGGA GGTGGCGCCG
GCCTTCGCGG TCGGCGTCGT CGGCAGCCTC GTGGCGGGGC CGCTCGCCGC GCTCGTCTAC
TTGCGGATCC TGCGCCGGGT CGAGGAGCCG GTGAGCGTCA TCGTGCTTCA GTTCGCTGCC
GCCTTCGGCC TGTGGATCGC CGCCGAGGCG ATGGAGCTGT CCGGCGTGCT GACCGTGGTG
AGCTTCGCCA TCACCGTGGC CCGCCGCGCC CCCGGCCAGA CCTCGCCACG CCTGCGGGTG
ATCTCGAACG CGGTCTGGGA GACGGCGATC TTCGTGCTCA ACGTCCTCGC CTTCGTGCTC
ATCGGCGAGC AGATCGGCCC GATCCTTTCT CGGATGACGC CCGAGCAGGA ATTCGCCTAC
GCCTCCGTCG CCGGGGCGGT GGTCGTGACC GTGATCCTCG TCCGCATCGC CTGGGTTCTG
CCGGCCAGCG CCGTCCGCCG CGTCGGCTTC GGCAGCGGCT CCGTCCATCC CGACGATCTG
CGCCCGACCC GCGACCTCGG TCTCGGTGCG GGTTTCGCCG TCTCGTGGTC GGGGATGCGC
GGCCTCGTCA CCATCGCCAC GGCTCTCGCC CTGCCCGAGG GCGGCCCCGA GGGCCGCGAA
TTCCCCTATC GCGACTTGAT CGTGCTCACC GCCTTCTGCG TCGTGATCGG TACATTGGTG
GTGCAGGGGC TGACCCTGCG CCCGATCCTG GCGCGTCTCG GGCTGGAGGA CAGCGATCCG
GTCGGGCACG AGGTCGGCCG GGCGCGGGCC GAGGCCTACG GAGCCGCCGT CGATGCTCTG
AAGGGCGATC AGTCGGAGGC GGCGGATGCC CTGCGCCGGG AGTTCCACGC CGCTCTGGCT
CAAGCCGAGG CGCATGAGGA GGGCCTTGCC CCGGAAGGCC TGCCGACCGA CGAGCCCCGC
CGCCGCGCGA TCCACGCCGC CCGCGACCGC CTCCTCGCCC TGCGCCGGAA CGGCCGGATC
GGCGACGACG CCTACTTCGT TCTGGAGCAG GAACTCGACT GGGCCGAGCT CAACGCGACG
CCGCGGGCCG AGGCGTAA
|
|---|
| Protein sequence | MFVFHWIVGV LVGAVLLAAL ARRLRAPYPA FLALGGVGLA FLPGMPSLSL DPELALALFL
APVLMDAGYS TSLRDLMRNA RPIAGLAVGA VAATTAAVAA VALWLVPDMP LAAAIVLGAV
VAPPDAVAAL SVLGHVSLPH RLATILRGES LLNDAASLLI YRLGVAAAVT GHFSVSEVAP
AFAVGVVGSL VAGPLAALVY LRILRRVEEP VSVIVLQFAA AFGLWIAAEA MELSGVLTVV
SFAITVARRA PGQTSPRLRV ISNAVWETAI FVLNVLAFVL IGEQIGPILS RMTPEQEFAY
ASVAGAVVVT VILVRIAWVL PASAVRRVGF GSGSVHPDDL RPTRDLGLGA GFAVSWSGMR
GLVTIATALA LPEGGPEGRE FPYRDLIVLT AFCVVIGTLV VQGLTLRPIL ARLGLEDSDP
VGHEVGRARA EAYGAAVDAL KGDQSEAADA LRREFHAALA QAEAHEEGLA PEGLPTDEPR
RRAIHAARDR LLALRRNGRI GDDAYFVLEQ ELDWAELNAT PRAEA
|
|---|
| |