Gene Mpop_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0872 
Symbol 
ID6309049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp925088 
End bp925765 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content72% 
IMG OID642649588 
Productribonuclease H 
Protein accessionYP_001923585 
Protein GI188580140 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAACCA TCGTCTACGC GGATGGCGGC TGCGACCCCA ATCCTGGCCC CGGCGGCTGG 
GGCGTGGTGA TCCAGGATCC CGCCGGCACC GTCGAACTGC ATGGCGGCGA CCGCGCCACC
ACCAACAACC GCATGGAATT GACCGCGGCG ATCCGCGCCC TGGAGCATTT CCCGGAAGGC
GCCTCCATCG AGATGCGCTG CGACAGCCAG TACGTGGTGA AGTCGGTCAC CGAGTGGATG
CGCGGCTGGA AGGCGCGGGG GTGGCGCACC GCCACGGGGC CGGTGAAGAA CATCGACCTG
ATGCAGCGCC TCGACGCGCT GGCCGCAGCC CGCGACGTGC GCTGGACCTG GGTGCGCGGC
CATGCCGGCG AGGCCGGCAA CGAACGCGCC GACCGTCTCG CGGCGCTGGG CCGGCGGGAG
GCTCTGAGTG GAACGACGTC GGGGGAGGCG ACGCTTTCGC CGGCCGATCC CGTGCCGGCG
CCGCCGGTGC CATCGCCTGC GCATACTAAG ACCGTGCAGG TGGCGCTGAG CGCGGATCTG
GCCAACGCCC TGTCGCGGGC GGCGGGCCGG GCCGGGATCA CGCCCCAGGC CTATCTCGAG
GACGCGGTGC GGCTGGCGCT GGAACTCAAG CCCCCGGGCG TCGCCCGGGT TCGGGCCGAG
TTGCAGAAGG CCTCCTGA
 
Protein sequence
MRTIVYADGG CDPNPGPGGW GVVIQDPAGT VELHGGDRAT TNNRMELTAA IRALEHFPEG 
ASIEMRCDSQ YVVKSVTEWM RGWKARGWRT ATGPVKNIDL MQRLDALAAA RDVRWTWVRG
HAGEAGNERA DRLAALGRRE ALSGTTSGEA TLSPADPVPA PPVPSPAHTK TVQVALSADL
ANALSRAAGR AGITPQAYLE DAVRLALELK PPGVARVRAE LQKAS