Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0872 |
Symbol | |
ID | 6309049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 925088 |
End bp | 925765 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642649588 |
Product | ribonuclease H |
Protein accession | YP_001923585 |
Protein GI | 188580140 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAACCA TCGTCTACGC GGATGGCGGC TGCGACCCCA ATCCTGGCCC CGGCGGCTGG GGCGTGGTGA TCCAGGATCC CGCCGGCACC GTCGAACTGC ATGGCGGCGA CCGCGCCACC ACCAACAACC GCATGGAATT GACCGCGGCG ATCCGCGCCC TGGAGCATTT CCCGGAAGGC GCCTCCATCG AGATGCGCTG CGACAGCCAG TACGTGGTGA AGTCGGTCAC CGAGTGGATG CGCGGCTGGA AGGCGCGGGG GTGGCGCACC GCCACGGGGC CGGTGAAGAA CATCGACCTG ATGCAGCGCC TCGACGCGCT GGCCGCAGCC CGCGACGTGC GCTGGACCTG GGTGCGCGGC CATGCCGGCG AGGCCGGCAA CGAACGCGCC GACCGTCTCG CGGCGCTGGG CCGGCGGGAG GCTCTGAGTG GAACGACGTC GGGGGAGGCG ACGCTTTCGC CGGCCGATCC CGTGCCGGCG CCGCCGGTGC CATCGCCTGC GCATACTAAG ACCGTGCAGG TGGCGCTGAG CGCGGATCTG GCCAACGCCC TGTCGCGGGC GGCGGGCCGG GCCGGGATCA CGCCCCAGGC CTATCTCGAG GACGCGGTGC GGCTGGCGCT GGAACTCAAG CCCCCGGGCG TCGCCCGGGT TCGGGCCGAG TTGCAGAAGG CCTCCTGA
|
Protein sequence | MRTIVYADGG CDPNPGPGGW GVVIQDPAGT VELHGGDRAT TNNRMELTAA IRALEHFPEG ASIEMRCDSQ YVVKSVTEWM RGWKARGWRT ATGPVKNIDL MQRLDALAAA RDVRWTWVRG HAGEAGNERA DRLAALGRRE ALSGTTSGEA TLSPADPVPA PPVPSPAHTK TVQVALSADL ANALSRAAGR AGITPQAYLE DAVRLALELK PPGVARVRAE LQKAS
|
| |