Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_0864 |
Symbol | |
ID | 6310295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 916141 |
End bp | 918423 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642649580 |
Product | penicillin-binding protein, 1A family |
Protein accession | YP_001923577 |
Protein GI | 188580132 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.930859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCGCCTGC CCAGCCTCAA GACGCTGACG ACGCGGATCA GCCGCGCGGC CCTGGCCTTC GACGCCTGGG TCAATGCGAG CCTGTACGAG GGCGGCCATT CCACGACGGA GGCCTATGAG CGCTTCCAGG CGCGGATGCA GGTCTTCTCG GTTCGTGGCT GGAAGCGCTA TGCCCTCGAC CTCACCAGCG AGGGCGTCAC CCTCGGCACG GTGGGCGCGC TGCTGCTGCT GTTCCTGGCC CAGCCGGCCT TCAACCTGAC GAGCGACAAC TGGCTCAAGG CGCAGGATCT CGCCGTCACC TTCCTCGACC GCTACGGCAC CGAGGTCGGG CGCCGCGGGA TCAAGCACGA CGACTCGCTC AAATTCGACG ACTTCCCCGA GCTGATGATC AAGGCGCTGC TCTCGACCGA GGACCGGCGC TTCTACGAGC ATTGGGGCAT CGATCCGATC GGCACCGCCC GCGCCCTGGT CTCGAACTCG TCCGGCCGGG GCAACATGCA GGGCGGCTCC ACGCTGACGC AGCAGCTCGC CAAGAACCTG TTCCTCACCA ATGAGCGCTC GCTGGAGCGC AAGATCAACG AGGCGTTCCT CGCCTTCTGG CTCGAGACGC ATCTGACCAA GAACCAGATT CTCAAGCTCT ATCTCGACCG CGCCTATATG GGCGGCGGCA CCTTCGGCGC GGTGGCGGCG GCGGATTACT ATTTCGGCAA GCGCCTGCAG GACGTCACGC TGGCGGAGGC TGCGATGCTC GCCGGCCTGT TCAAGGCGCC GACCAAGTAC TCGCCCAACG TCAACCTGCC CGCCGCCCGC AGCCGCGCGG TGGACGTGCT GCACAACATG GTCGAGGCCG GCTTCGTCAC CGAGGGCCAG ATCCAGACGG CCTTGCGCAA CCCGGCCACC CCGGTGACCC GCACCAAGGA CATCACCGCC GACTACTATC TCGATTGGGC CTTCAACGAG GTGAAGCGGA TGGCGGATGC GGGCAAGCTC CGCAACGACC GCGTGCTGAC CGTCAAGACG CCCCTCGACC TCTCGATCCA GCGTTCCGCC GATCAGGCGG TCGAGAACAC CCTGCGCCGC TTCGGCGACC AGTACGACGT GGACGAGGCG GGTGTGGTGA TCCTCGATCC CGACGGCGCC CTGCGGGCCA TGGTCGGCGG CGCGGATTAC GGCGAGAGCC AGTTCAACCG CGCCACCGAT GCGCTGCGCC AGCCGGGCTC CTCGTTCAAG CCCTACGTCT ACGCCGCGGC CTTGGCCTCG GGCCTGTTCA AGCCGGACAC GCCGGTGGTG GATTCGCCGG TCTGCGTCGG CAACTGGTGC CCGCAGAACT ACGGCCGCTC CTATTCCGGC CGCCAGCCGA TGTGGCTCGC CGTGGCGAAA TCGGTCAACA CGATCCCGAT CAAGGTCACC ACCGCCATCG GCAAGGGGCT CGGCATCACC CACGACTGGA AGGCGGCCAA GGCGGGCCGC GAGAAGATCA TCCAGCTCGC CAAGGCGATG GGCGTGACGA CGCCGCTCAC CGATACGCCC TCGCTGCCGA TCGGCGCCAC CGAGGTGACG GTGATGGATC AGGCCGCGGG CTTCGCCGTC TTCGCCAATG GCGGACGGGT CGCCAAACCC TACGTCGCCA CCGAGGTGCG CAATTCCAGC GGCGAGGTGA TCTATCGCCA CGCCGACGAG AAGCCGGTGC AGGTGCTCTC GTCCCAGGTG ACGGCGGACA TGAACTACAT GCTCAACAAG GTCGTCGAGG AAGGCACCGC GCGAAAGGCC CAGATCGAGG GTGTGAAGGT CGCGGGCAAG ACCGGCACCA CCAACGGCTA CCGCGACGCC TGGTTCGTCG GCTACACCGG CAACTATGTC GGCGCCGTCT GGTACGGCAA CGACGACCAC AGCCCGACCA ACAAGATGAC CGGCGGTTCG CTCCCCGCGA TGACGTGGCA CGAGATCATG GCGCCCGCCC ACCAGGGCAT CGAGCTGAAG CCGATGCCCG GCCTCAACGA CCGCAAGGGC GCGCCGCAGG TCGCCCAGGC CCAGGCCGAC GGGGCCGCGG CCGCCGCCAG CACGAGCGGC CGGCTCTCGC GCCGCTCCTT CGAGGTCTTG TCGGGCCTCA ACGGCCTGTT CCGCACCGTC GAGACCAGCC GCTCGGCCGC CAAGAACGAG TCTGGCAAAC CCGATCCGGC GCGCTCCGGC TCCGTCGCCC CGGAGCGGAT GCGGGCGCCC GGCCTCGCGC CGGTCGACGT CGCCGAGGGC GCGCGCGCCT CCGGTGGTTT CGGAACGCCT TGA
|
Protein sequence | MRLPSLKTLT TRISRAALAF DAWVNASLYE GGHSTTEAYE RFQARMQVFS VRGWKRYALD LTSEGVTLGT VGALLLLFLA QPAFNLTSDN WLKAQDLAVT FLDRYGTEVG RRGIKHDDSL KFDDFPELMI KALLSTEDRR FYEHWGIDPI GTARALVSNS SGRGNMQGGS TLTQQLAKNL FLTNERSLER KINEAFLAFW LETHLTKNQI LKLYLDRAYM GGGTFGAVAA ADYYFGKRLQ DVTLAEAAML AGLFKAPTKY SPNVNLPAAR SRAVDVLHNM VEAGFVTEGQ IQTALRNPAT PVTRTKDITA DYYLDWAFNE VKRMADAGKL RNDRVLTVKT PLDLSIQRSA DQAVENTLRR FGDQYDVDEA GVVILDPDGA LRAMVGGADY GESQFNRATD ALRQPGSSFK PYVYAAALAS GLFKPDTPVV DSPVCVGNWC PQNYGRSYSG RQPMWLAVAK SVNTIPIKVT TAIGKGLGIT HDWKAAKAGR EKIIQLAKAM GVTTPLTDTP SLPIGATEVT VMDQAAGFAV FANGGRVAKP YVATEVRNSS GEVIYRHADE KPVQVLSSQV TADMNYMLNK VVEEGTARKA QIEGVKVAGK TGTTNGYRDA WFVGYTGNYV GAVWYGNDDH SPTNKMTGGS LPAMTWHEIM APAHQGIELK PMPGLNDRKG APQVAQAQAD GAAAAASTSG RLSRRSFEVL SGLNGLFRTV ETSRSAAKNE SGKPDPARSG SVAPERMRAP GLAPVDVAEG ARASGGFGTP
|
| |