Gene Mpop_0820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0820 
Symbol 
ID6312489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp877065 
End bp877688 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content73% 
IMG OID642649536 
Productprotein of unknown function DUF330 
Protein accessionYP_001923533 
Protein GI188580088 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.24879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTC CTCTCTCGCC TGCCCTTGCC GGCCGTCTCC TGTCCGGCCG CTTCCTGCGG 
GCGGGCGCCC TGCTCGCGCC GCTCGCGCTC CTCGGCGGCT GCGGCGGCGG CGCCACGCCG
CTGACCTTCG ACCTTGCCGC CCTGCCGGGG CAGGCCCGGG CCGGCGGCGC GGCGCGCTCG
ATCGTCGTGT CCGAGCCCGT CGGCCTGCAG CCGATGGAGG CCGACCGCAT CATCGTGCGC
GAGCCCGGCG GCTCCCTCTC CTTCCTCGGC GGCGGCCAGT GGGCCGACCG TCTGCCGCGT
CTGATCCAGA CGCGGGTGAT CCAGAGCCTG GAGAATACCG GCCGCCTGCG CTCGGTTTCG
CGCCCGACCG ACAAGGTGCC GTCGGATTAC CAGCTCGTCA GCGAGATCCG CGAGTTCGAC
ATCAATTCCG GCACCGGCGA AGCGGTGGTG GATCTCTCGG CCAAGCTCAT CGCCGAGGGC
AGCGGCCGGG TCGTCAACGC TCGCGTCTTC ACCGCCCGCG TGCCGGTGCA GAAGGTCGAT
CCGCAGAGTG CCGCCGCCGG CCTCGACGCG GCGCTCGGCC AAGTGCTCGC CGACCTCGTG
CGCTGGGTGA ACACCGGGCG GTAA
 
Protein sequence
MRLPLSPALA GRLLSGRFLR AGALLAPLAL LGGCGGGATP LTFDLAALPG QARAGGAARS 
IVVSEPVGLQ PMEADRIIVR EPGGSLSFLG GGQWADRLPR LIQTRVIQSL ENTGRLRSVS
RPTDKVPSDY QLVSEIREFD INSGTGEAVV DLSAKLIAEG SGRVVNARVF TARVPVQKVD
PQSAAAGLDA ALGQVLADLV RWVNTGR