| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0801 |
|---|
| Symbol | |
|---|
| ID | 6310635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 859051 |
|---|
| End bp | 860517 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649517 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001923514 |
|---|
| Protein GI | 188580069 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.185769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.110715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA GTACCGAGCA GGAGCGGATC GATGCCGAGC TGGTCCGCGT CTCCGACAGC
TCCGATCCGT TCGCCGCCGC CGTCAAGGCG ACGCGGATGC CGATGCTCAT CACCGACCCG
TACGGGCCCG ACAACCCGAT CATCTTCGTC AACCACGCCT TCACCAAGCT CACCGGCTAC
AGCCGTGAGG AGATCCTCGG GCGGAACTGC CGCTTCCTCC AGGGGCCGGA GACCGACCCG
CGCGACGTGG GCAGGATCCG CGACGCGATC GAGCGGCGGG TGCCGATCGA GATCGAGCTC
CTCAACCACA AGAAGAACGG CGAGGTGTTC TGGAATCGCC TGCTGATCTC GCCGGTCTTC
GACGACGAGG GGCGGCTCAC CTACTTCTTC GCCTCGCAGT TCGACGTGAC GCTGGAGCGC
GACCGGATGG TCCGGCTGCA GCGCGACCGT GACGCCCTGG AGCAGGAGGT CGAGCGCCGC
AACGACGACC TCACCCGCAG CGAGCACCGC CTCGAATTCA TGCTCGCCGC CGGCCGGCTC
GGCGCCTGGA CCCTCGACCT CGCCGAACGC CGGCTCGTGG CATCCGACCT GTGCAAGCAG
AATTTCGGGC GCCCCCTCGG TGAGCCCTTC ACCTACGACG ATCTCGTCCA GGCGGTGGTG
CCGGAGGATC GCGAGCGGAT GCAGGCGGCG ATGCAGGCTG CGATCGACCG CCGGAGCGAT
TACGACGTCG AGCACCGCGT CTCGGCGCCC TGCGGCGAGG TGCGCTGGGT GCAGCTGCGC
GGCCGGGCCT ACTACCGGGC GGACGGCGCG CCGCTCTCCA TGGCCGGCAT CTCGCTCGAT
GTGACCGACC GCAAGCGGGC CGACGAGCAG CGCGCCCTGC TCGCCGCCGA GATGAAGCAC
CGGGTGAAGA ACTCGATCGC GACGGTCCAG TCCATCGCCC ACCAGACCCT GCGCAACGCC
GCCTCCCTGG ACGATGCGCG CCGGACGCTC GACGCCCGCC TCAACTCGCT TGCCACCGCC
CACGACATCC TCACCTCGGA GGCGACCACG GGCGCCACGC TCGCCGAGGC GGTGGAGAGC
GCCCTGCAGC CGTTCCGCGT CAGCCCACGC AACCGCATCC GGGTCGGCGG GCCGGAGGTG
CGCCTGACGC CCCGCCTGAC GCTCGCCGTG GTGATGGCGC TGCACGAACT CGCCACCAAC
GCGGTGAAGT ATGGCGGCCT CTCGAACGAG ACCGGCCGGG TGATCCTGAA CTGGGAGGTC
GAGGGCGGAG CGCCCAGGCG CCTGACCATG CGCTGGGAGG AGCTGGACGG TCCCCCGGTC
GAGAAGCCGT CGCGGGTCGG CTTCGGCACC CGCATGATCG AGCGGGTTCT GGCCGCCGAG
TTCGGCGGCG AGGCCAAGAT CGACTACCGC CCCCGCGGCC TCGTCCTGAC CGTCGAGGCG
CCGCTGCCGG AGCGCGAGGT CGGCTGA
|
|---|
| Protein sequence | MTSSTEQERI DAELVRVSDS SDPFAAAVKA TRMPMLITDP YGPDNPIIFV NHAFTKLTGY
SREEILGRNC RFLQGPETDP RDVGRIRDAI ERRVPIEIEL LNHKKNGEVF WNRLLISPVF
DDEGRLTYFF ASQFDVTLER DRMVRLQRDR DALEQEVERR NDDLTRSEHR LEFMLAAGRL
GAWTLDLAER RLVASDLCKQ NFGRPLGEPF TYDDLVQAVV PEDRERMQAA MQAAIDRRSD
YDVEHRVSAP CGEVRWVQLR GRAYYRADGA PLSMAGISLD VTDRKRADEQ RALLAAEMKH
RVKNSIATVQ SIAHQTLRNA ASLDDARRTL DARLNSLATA HDILTSEATT GATLAEAVES
ALQPFRVSPR NRIRVGGPEV RLTPRLTLAV VMALHELATN AVKYGGLSNE TGRVILNWEV
EGGAPRRLTM RWEELDGPPV EKPSRVGFGT RMIERVLAAE FGGEAKIDYR PRGLVLTVEA
PLPEREVG
|
|---|
| |