| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0782 |
|---|
| Symbol | |
|---|
| ID | 6309887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 842197 |
|---|
| End bp | 843057 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642649498 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001923495 |
|---|
| Protein GI | 188580050 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0488091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATA CAAGCGATCC CCGTCTCACC CCGGCCCGGC CCGATCTCGC CGACATCCGC
CTGAAGGGCG TCGTCGCGGC GGAGCGCTAC GTCGCGGGCG AGCCGGCCCG GGTCGTCGTG
CCCTCCACCC CCCTGCGCCG CGCCCCCCGT GCCGAGGCGG GCCTCGACAC CGAGGCGGTG
ATGGGCGACG CGGTGACGGT GTTCGAGAGC CGCGATCGCT TCGCCTGGGT GCAGATCGCC
CGCGACGGCT ATGTCGGCTA CCTGCCGGAA GGGGCGCTCG GGCCCGTCGA TCCGGTCCCG
ACCCATCGCG TCGCTGCCCT GCGCACCTTC GTCTATCCGG CGCCCGACCT GAAGCGGCCG
CACCTCGCCC ATCTGAGCCT CGGCGCGGCC TTCGCCGCCG AGGCACGCGA GGGCGAGTAC
TGGCGCCTCG CGCGGGGCGG CTACGTCTAC GCCGGCCACG CCGTACCCCT CGGCACGGTC
GAGCCGGATT TCGCGGCGAC CGCCGAGCGC CTCATCGGCA CGCCCTATCT CTGGGGGGGC
CGCACCAGCC TCGGCCTCGA CTGCTCGGGC CTCGTCCAAC TCTGCCTGGA GATGGCGGGG
CGCGTCTGCC CGCGGGACGC CGACCAGCAG GAGCGGGCTT TGGGCACCGC GCTCCCGCCG
GGGCTCGACG GCCTGCAGCG CGGCGACCTC GTGTTCTGGA AGGGCCATGT CGGGCTGATG
CTCGACGCCG ACCGGCTGAT CCACGCCAAC GGCCACCACA TGGCGGTGGC GGTCGAGCCC
CTGCGCGAGG CCGTCGGGCG CATCGCCGTC AAGAGTTTCG GCGCCGTCAC CTCGATCCGG
CGGCTCGATC CGTCCGCCTG A
|
|---|
| Protein sequence | MPDTSDPRLT PARPDLADIR LKGVVAAERY VAGEPARVVV PSTPLRRAPR AEAGLDTEAV
MGDAVTVFES RDRFAWVQIA RDGYVGYLPE GALGPVDPVP THRVAALRTF VYPAPDLKRP
HLAHLSLGAA FAAEAREGEY WRLARGGYVY AGHAVPLGTV EPDFAATAER LIGTPYLWGG
RTSLGLDCSG LVQLCLEMAG RVCPRDADQQ ERALGTALPP GLDGLQRGDL VFWKGHVGLM
LDADRLIHAN GHHMAVAVEP LREAVGRIAV KSFGAVTSIR RLDPSA
|
|---|
| |