| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0677 |
|---|
| Symbol | |
|---|
| ID | 6312248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 720490 |
|---|
| End bp | 722937 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 642649385 |
|---|
| Product | penicillin-binding protein, 1A family |
|---|
| Protein accession | YP_001923390 |
|---|
| Protein GI | 188579945 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.187464 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCGC AGGGACCGGA CAGGCCGGGC GAGGACGGGA CCGAGACCCG GGCCGCGGCG
CGCGAGGCCG CGCGGGCGGC CGCCCTGCTC GCGCGCCAGC TCGGCCGCCT CGCCGGGAGC
GCGGGCCGCA GCGTCTGGCG CAGCGGAACC GCCGCCGCCA GAGGCGCCGC GCGGGAGGCC
GCGCCGGTCC TCGCCCGAAC GCGCACCCGC CTGCGCGCGA CGGGACACCG GGATGCCGCC
GCAGCCCCGG TCGCCGAGAC GGTCCCGCAG GCGCCGCGCC GCTCGACCCG CCTGCCCCGC
CGGCCCTGGC TCCTCGGGCT CGCCGTCCTC GTCGGCCTGC CGCTGGTGAT CCTGGCCGGC
TATGTCTTCG CTGCCTTCGC CACCCTGCCG CCGCTGGGCG GAGCCGCGCC GGAGGCGGGC
CAGCGCGCCC TCGTGGTGGA GGCCGAGAGC GGCCGATCCT TTGCCACTCG CGGCGCCTTC
CAGGGCGAGC GGCTCACCGA GAAGACCCTG CCGCCCCGCC TCGCCCAGGC GATCGTCGCG
ATCGAGGACC GGCGCTTCTA CAGCCACTGG GGAATCGACC TGCGCGGCAT GGCGCGGGCC
GTCTGGCGCA ATGCCACCGG CGGCGGCGTG CGCGAGGGCG GATCGACCAT CACCCAGCAA
TATGCCCGGC TCACCTCGCT CACCCAGGAG AAGACGCTCA AGCGCAAGAT CCAGGAGGCG
TTCCTGGCCC TGCGCCTGGA GAGCACCCTG TCGAAGCCCG AGATCCTCGT CGGCTATCTC
AACACCGCCT ATTTCGGCGC CGGCGCCTAT GGGGCGGATG CGGCGGCCCG GCGCTATTTC
GGTCACGGGG CCGAGGGGCT GACCCTGCCG GAGGCGGCGA TGCTCGCCGG CCTCGTGCGC
GCCCCTTCGC AGCTCGCCCC GACCCGCAAT TTCGGCGGCG CCAAGGAGCG GGCCGACCTC
GTGCTTCAGG CCATGGTCGA GACCGGCGCG ATCAGCCAAG CCGAGGCCGA CAAGGCGCGG
GCGGCGAAGC TGACGCTCCA CACCCCGCCC GAGACGCCGC CGGGCACCAA CTACTTCCTC
GACGCGCTCC AGGGCGAGGT GAAGCGGCTG ACCGAGGCGG CCGGCGACGT CACCGTGCGC
TCGACGCTCA ACCTCGAGCT CCAGAGCCTC GCCGAGGGCG TGCTCGCCCG CCGACTCGAC
GCGGAGGGCG GAAAGAAGAA GGTCGGCCAG GGCGCGCTGG TGGCGCTCGC TCCGGACGGA
GCGATCCTCG CCATGGTGGG CGGGCGCGAC TACGAGGACA GCCAGTTCAA CCGGGCGACC
CAGGCCAAGC GGCAGGCCGG CTCGCTGTTC AAGCTGTTCG TGTACCTCGC CGCCTACGGC
AAGGGCTTCA CCCCCGACAG CGTGCTCGTG GATCGCCCGA CCCAGATCGG CGAGTGGGAG
CCGCAGAACG CCAACAACCG CTTTCGCGGG GCACTGCCCC TGCGCTCGGC CTTCGCGCTC
TCGGTCAACA CCATCGCCGC CCAGCTCGGC GAGGAGGTCG GGATCGCGTC CGTCATCGCC
GAAGCGCGCC GCCTCGGGGT GCAATCGGAC CTGCCGGAGG TGCCGAGCCT CGCGCTTGGC
TCGGCCGACG TCTCGCTCCT CGAGATGACC CGCGCCTTTG CCGGCGTGCT CGGCCCCGGC
GTGCCGGTGG AGCCCTACCT CGTCCGCACG ATCCGCGGGA GCGGCCCGCA AGCCCTCTAC
CAGCGCCCCG CGCCGAAGGC CGGGTCACCG ATGGATTCGC AGGTCCAGTC GATGATGCTC
GACTCGCTCC AGGCAGTGGT CGAATCCGGC ACCGGCAAGG CGGCGCGGGT CGGCGGCCTT
GCGGTTGGCG GCAAGACCGG CACCAGCCAG GATTTCCGCG ATGCGTGGTT CATCGGGCTC
ACGCCGGACA TGATCGTCGG CGTGTGGGTC GGCAACGACG ACAACGCGCC GATGAACAAG
GTGACCGGCG GCGACATTCC GGCTCGCGTC TTCCACGACT TCGTCGAGCG GGCACAGAAG
GTGCTGAAGG GCCGCAAGCG CCCCGCGCCG TCCGCCGCGC GGGCGGAGCC GGTCCCGGCC
AGCGCCGTGG CCCCCGCGCC GAGCCCGGCC ACGGGCGAGG TGCGCGGCGT GCCGGAGGTC
GTCGATACCG GCACGCTGAC GATCCGCGGA CGGACGGTGC ACCTGCTCGG CGTCGTCGGC
GAGGGCGGCG CACTCGCCCG CCAGCTCGCG CGCTACCTGC GCCGCCGCGA GGTCGTCTGC
TCGGGCGAGC CCGCGGGACT CCGCTGCCGG CTGGATGGCG ACGACCTCGC CGCCCTGATC
GTCACGGCCG GCGGCGCGCG GGCGAGCGAG GACGCACCGT CCGACCTGAT CGAGGCCGAG
GATCAGGCCC GGGCCGAGCG CGCGGGCTTG TGGCAACGGG AGCGGTGA
|
|---|
| Protein sequence | MTAQGPDRPG EDGTETRAAA REAARAAALL ARQLGRLAGS AGRSVWRSGT AAARGAAREA
APVLARTRTR LRATGHRDAA AAPVAETVPQ APRRSTRLPR RPWLLGLAVL VGLPLVILAG
YVFAAFATLP PLGGAAPEAG QRALVVEAES GRSFATRGAF QGERLTEKTL PPRLAQAIVA
IEDRRFYSHW GIDLRGMARA VWRNATGGGV REGGSTITQQ YARLTSLTQE KTLKRKIQEA
FLALRLESTL SKPEILVGYL NTAYFGAGAY GADAAARRYF GHGAEGLTLP EAAMLAGLVR
APSQLAPTRN FGGAKERADL VLQAMVETGA ISQAEADKAR AAKLTLHTPP ETPPGTNYFL
DALQGEVKRL TEAAGDVTVR STLNLELQSL AEGVLARRLD AEGGKKKVGQ GALVALAPDG
AILAMVGGRD YEDSQFNRAT QAKRQAGSLF KLFVYLAAYG KGFTPDSVLV DRPTQIGEWE
PQNANNRFRG ALPLRSAFAL SVNTIAAQLG EEVGIASVIA EARRLGVQSD LPEVPSLALG
SADVSLLEMT RAFAGVLGPG VPVEPYLVRT IRGSGPQALY QRPAPKAGSP MDSQVQSMML
DSLQAVVESG TGKAARVGGL AVGGKTGTSQ DFRDAWFIGL TPDMIVGVWV GNDDNAPMNK
VTGGDIPARV FHDFVERAQK VLKGRKRPAP SAARAEPVPA SAVAPAPSPA TGEVRGVPEV
VDTGTLTIRG RTVHLLGVVG EGGALARQLA RYLRRREVVC SGEPAGLRCR LDGDDLAALI
VTAGGARASE DAPSDLIEAE DQARAERAGL WQRER
|
|---|
| |