Gene Mpop_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0630 
Symbol 
ID6311323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp674172 
End bp675734 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content70% 
IMG OID642649338 
Productsignal recognition particle protein 
Protein accessionYP_001923343 
Protein GI188579898 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAG GCCTTTCCGA CCGCCTTTCC GGCATTCTCT CCGGGCTGAC GCGCCGCGGC 
GCGCTGACGG AAGCCGACGT CACCGCCGCC ATGCGCGAGG TGCGCCGCGC CCTGCTGGAG
GCGGACGTCG CGCTCGAAGT GGTGCGCTCG TTCACCGACA AGGTGCGCGA GAAGGCGGTG
GGCGCCGTCG TGCTCAAGTC GGTGACGCCC GGCCAGATGG TCGTGAAGAT CGTCAACGAC
GAGCTCATCG CGATGCTCGG CACCGATGCC AGTGTCGTCG ACCTGAACGC CCCCGCCCCC
GTCGCCATCC TGATGGTCGG CCTCCAGGGC TCGGGCAAGA CGACCACCAC GGCCAAGATC
GCGCGCCGCC TGAACCAGCG CGAGAAGCGC CGGGTGCTGC TCGCCTCCCT CGACACCCGT
CGCCCCGCGG CGATGGAGCA GCTCGCGGTG CTGGCCAAGC AGGTCGAGGT CGAGAGTCTG
CCGATCGTCG CCGGCCAGTC GGCGGTGCAG ATCGCCCGGC GCGCCATGGA GGCCGCCCGG
CTCGGCGGCT TCGACGTGGT GATGCTCGAC ACCGCCGGCC GCACCACCGT CGACGAGGGC
CTGATGGCCG AGGCCGCCGA GGTGAAGGCG GCGACGAACC CGCACGAAGT GCTGCTGGTG
GCCGACGCGC TCACCGGCCA GGACGCGGTG AACACGGCGC GGGCCTTCGA CCAGCGCCTC
GGCGTCACCG GCATCGTCCT GACCCGCATG GACGGCGATT CCCGCGGCGG CGCGGCGCTC
TCCATGCGCG CCGTCACCGG CAAGCCGATC AAGCTCGTCG GCGTCGGCGA GAAGGTCGAC
GCGCTCGAAG AGTTCCACCC GCAGCGGGTG GCCAACCGCA TTCTCGGCAT GGGCGACATC
GTCTCGCTCG TGGAGAAGGC GGCCGAGACC ATCGACCACG AGCAGGCCCT GCGCACCGCC
GAGAAGATGC GGAAGGGCAA GTTCGACCTC GAAGACCTGT CGATGCAGCT CGCCCAGATG
GAGAAGATGG GCGGCATCGG CGGCCTGATG GGGATGCTGC CCGGCATGGG GCAGATCAAG
AAGCAGGTCG AGGGCGCCAA TCTCGACGAG AAGATGTTCA AGCGCCAGCG CGCCATCATC
TCCTCGATGA CGGCCCAGGA GCGCAAGAAC CCCGACCTCC TCAAGAACAG CCGCAAGAAG
CGCATCGCGG CGGGCGCCGG CGTGAAGGTC GAGGAGATCA ACAAGCTCCT GAAGATGCAC
CGGACCATGG CCGACATGAT GAAGGCGATG GGATCGGGCA AGCGCGGCGG CATCGGTCAG
GCGCTGGGCA ACATGTTCGG GCTGGGCGGC GGCATGCCGG GCGGCCTTCC CGGCGGCATG
AAGCTGCCGC CGGGCATGCC CGAGCCGACG CCGGAGCAGA TCGCCGAGAT CGAGAAGCAG
TTCGGCGGCA AGCTGCCGCC GATGCCGGCG GGCCTGGGCG GCGGAAAGAT GCCGGGGCTT
CCGGGCCTGG GCGGCCCGAA GCTGCCGGGG CTGGGCGGCT TCCTGCCGGG TAAGAAGAAA
TGA
 
Protein sequence
MFEGLSDRLS GILSGLTRRG ALTEADVTAA MREVRRALLE ADVALEVVRS FTDKVREKAV 
GAVVLKSVTP GQMVVKIVND ELIAMLGTDA SVVDLNAPAP VAILMVGLQG SGKTTTTAKI
ARRLNQREKR RVLLASLDTR RPAAMEQLAV LAKQVEVESL PIVAGQSAVQ IARRAMEAAR
LGGFDVVMLD TAGRTTVDEG LMAEAAEVKA ATNPHEVLLV ADALTGQDAV NTARAFDQRL
GVTGIVLTRM DGDSRGGAAL SMRAVTGKPI KLVGVGEKVD ALEEFHPQRV ANRILGMGDI
VSLVEKAAET IDHEQALRTA EKMRKGKFDL EDLSMQLAQM EKMGGIGGLM GMLPGMGQIK
KQVEGANLDE KMFKRQRAII SSMTAQERKN PDLLKNSRKK RIAAGAGVKV EEINKLLKMH
RTMADMMKAM GSGKRGGIGQ ALGNMFGLGG GMPGGLPGGM KLPPGMPEPT PEQIAEIEKQ
FGGKLPPMPA GLGGGKMPGL PGLGGPKLPG LGGFLPGKKK