Gene Mpop_0603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0603 
Symbol 
ID6313396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp650389 
End bp651099 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content70% 
IMG OID642649311 
Productflagellar L-ring protein 
Protein accessionYP_001923316 
Protein GI188579871 
COG category[N] Cell motility 
COG ID[COG2063] Flagellar basal body L-ring protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.754309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.243473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCTG CTCCCTCCGT CGCGGCGGCC CTGCTCGCCC TCTCCCTCGG CGCCTGCCAG 
AGCGACATCG CCCAGATCAG CCGCCCGCCC GTGCTGACGC CGATCGGCAG CGGGCTCAAC
GCGCCGCGCG AGCCTCTGCC GACGACCTTC GGTGCGCTCG GCGCGCGCCA CAGCTACCAT
TCGACCTGGA GCCCGGCGAG CGCGGCGCTC TACCAGGATC CGCGGGCCCG CGACGTCGGC
GACGTCATCA CGGTGAGCAT CGCCATCAAC GACAAGGCGC AGTTCGACAA CGCGAGCGAG
CGCGCCCGCA GCCAGAAGAG CAGCCTCGGC TTCGATTTCG GCTACGGTGT CTCCGCGCTG
AAGGACACGG CCACGGCGGA TACCGGCATC CGCTCCGGCA CCGAGACCAA GGGCCAGGGC
TCGATCGACC GCAAGGAATC GCTCAGCCTC TCCGTCGCGG CGGTGGTCAC CGAGGTGCTG
CCCAACGGCA ACGTGGTGAT CTCGGGCTCG CAGGAGGTGC GGGTCAACAA CGAGGTACGT
GTGCTCGAAG TCGCCGGCAT CGTCCGCCCG CGGGACATCT CGCGCAAGAA CACCATCGAC
TACGACAAGA TCGCCGAGGC GCGCATCTCC TATGGCGGGC GCGGACGCAT CACCGACGTG
CAGGGGCCGA CGCTCGGCCA GCGGGTCTTC GAGACCGTGG CGCCGTTCTG A
 
Protein sequence
MRPAPSVAAA LLALSLGACQ SDIAQISRPP VLTPIGSGLN APREPLPTTF GALGARHSYH 
STWSPASAAL YQDPRARDVG DVITVSIAIN DKAQFDNASE RARSQKSSLG FDFGYGVSAL
KDTATADTGI RSGTETKGQG SIDRKESLSL SVAAVVTEVL PNGNVVISGS QEVRVNNEVR
VLEVAGIVRP RDISRKNTID YDKIAEARIS YGGRGRITDV QGPTLGQRVF ETVAPF