| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0580 |
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| Symbol | |
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| ID | 6312998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 625777 |
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| End bp | 626997 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 642649288 |
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| Product | glycine oxidase ThiO |
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| Protein accession | YP_001923293 |
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| Protein GI | 188579848 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0590429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00474558 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCAGACC TGCTGACCTC CCCGATCGGC CAGAGACGCG CCCTCGCGAT GCGTCCGCGC
GCCGCCGACC TGCCGCAGCG TGCCGACATC GCCGTAGTCG GAGCGGGGCT GATCGGCCTG
TCGATCGCGT GGCGCCTCGC GCAGGCCGGC CGTTCCGTCG TCGTTGTGGA GCGTGGGCGC
GTCGGCAGCG GGGCGAGCCT TGCCGCCACC GGCATGCTCG CGCCGGCCGC CGAGCACGAA
CCCGGCTCTG ACCTGCTGCT GCCGCTGGCG CTCGAATCCC TGCGCCGCTG GCCGGCCTTC
CGCGACGCGC TCCAGGCGGC CTCCGGCACG ACCATCGATT ACCGCGAGGA CGGCACCCTC
GTGATCGCCA TCGGCCGTGA CGAAGTCGAG CGCCTGCGCT TCCGCCACGA CCTGCAACGG
CGCTCGAATG TTGCCGCCGA ATGGCTCTCC GGCCCGGAGG TTCGCGCCCG CGAGCCGCTG
CTGCGCCCCA ACGTCACCGC CGGCATCCTC TGCCCGCTCG ACGCGCAGGT CGATCCCCGC
CTCGTGATGG AGGCGCTGCT CGGCGCCTGC GAGGCGGCAG GCGTCACCAT CGTCGAGGAC
GTCGCCGTCG AGGGGCTGGA GCACGAAGGC GGGCGCGTCG CCGGCCTGCG CGCTGCCGGC
CGCGTGCTGG CGGCCGAGAC GGTGATCCTC GCCGCCGGTG CCTGGAGCGG GGCGGCGGGG
CTGCTGCCCG ACGACCTCGC CCTGCCGGTG CGTCCGCTCA AGGGGCAGTC GCTGGCGCTG
CGCACCACCA AGCGCACGGG CACGCTCTCC CGCATGGTCT GGACCGACGC GGTGCACATG
GCGCCCAAGG GAGACGGGCA TCTCATCGTC GGCGCGACGG TGGAGGATTG CGGCTTCAAC
AGCGGCGTCA CCGCGGGCGG GTTGTTCGCC CTGCTGGAGG GCGCGCGGCG CGTCCTGCCC
GGCATCGAGG AAATGGAGAT CGACGCGGTC TGGAGCGGTT TCCGCCCGAC CTCGGACGAC
GACGCGCCGA TCATCGAGGA GGCGGCGCCC GGCCTCGTCG TCGCCACCGG CCATCACCGC
AACGGCTATC TGCTCGCCCC CGCCACCGCC GATGCGGTCG CCGCGCTCGT CGGCGAGGGC
ATGCTGCCGG ACTTCGCCCG CGGCTTCGGC CGGGGGCGCT TCACATCGCC GAACGAGAGC
CGGGGGAGGG CCGTGGCATG A
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| Protein sequence | MSDLLTSPIG QRRALAMRPR AADLPQRADI AVVGAGLIGL SIAWRLAQAG RSVVVVERGR
VGSGASLAAT GMLAPAAEHE PGSDLLLPLA LESLRRWPAF RDALQAASGT TIDYREDGTL
VIAIGRDEVE RLRFRHDLQR RSNVAAEWLS GPEVRAREPL LRPNVTAGIL CPLDAQVDPR
LVMEALLGAC EAAGVTIVED VAVEGLEHEG GRVAGLRAAG RVLAAETVIL AAGAWSGAAG
LLPDDLALPV RPLKGQSLAL RTTKRTGTLS RMVWTDAVHM APKGDGHLIV GATVEDCGFN
SGVTAGGLFA LLEGARRVLP GIEEMEIDAV WSGFRPTSDD DAPIIEEAAP GLVVATGHHR
NGYLLAPATA DAVAALVGEG MLPDFARGFG RGRFTSPNES RGRAVA
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