Gene Mpop_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0550 
Symbol 
ID6313764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp595982 
End bp596617 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content69% 
IMG OID642649252 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001923263 
Protein GI188579818 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.844847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGG TGGAGGCGAT CGGCTATCTC GGGACGGCGC TCACCGTCGC CTCGTCGGCG 
ATGGGGACGA TGATCCCGCT GCGCATCGTG GCCCTCTGCG CGAGTTGCGC CGTCATCACC
TACGGCTACC TCATCGGCAG CGTGCCGGTG ATGCTGACGG AAGCGATCCA GATCCCCTTC
AACGCGTGGC GGCTCTACGA GATGGTCCGC CTCGTGCGCG AGACCCAGCG GGCGGCCTCC
GGCGACCTCT CCCTCGACTG GCTGAAATCC TTCGGCACCT CCCGGCGCTT CCGAGCCGGC
GAGGTGCTGT TCCTGAAGGG GGACCCGGCC CACGAGATGT ACCTGATCGA GAGCGGGCGC
TTCCGCATCG CCGAGCACGG GCTCGACGTT CAGCCGGGCC AGATCGTCGG CGAACTCGGC
ATGCTCTCGC CCGGCAACCG GCGCACCGGC TCGCTCGCCT GCGTGGAAGC CGGCACCGCG
CGCTGCCTGT CCTATTCCGA GGTCAAGCAG CTCTACTATC AGAACCCGGA ATTCGGCTTC
TACTTCCTGA AGCTGACGAG CGAGCGCCTG TTCCAGGGCG CCGCCGAGGC GGCGGGCGCG
CCGCGCCCCG CACCCGCAGG CAGCGACGTG CTGTGA
 
Protein sequence
MNWVEAIGYL GTALTVASSA MGTMIPLRIV ALCASCAVIT YGYLIGSVPV MLTEAIQIPF 
NAWRLYEMVR LVRETQRAAS GDLSLDWLKS FGTSRRFRAG EVLFLKGDPA HEMYLIESGR
FRIAEHGLDV QPGQIVGELG MLSPGNRRTG SLACVEAGTA RCLSYSEVKQ LYYQNPEFGF
YFLKLTSERL FQGAAEAAGA PRPAPAGSDV L