| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0535 |
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| Symbol | |
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| ID | 6309018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 575159 |
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| End bp | 576178 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642649236 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001923248 |
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| Protein GI | 188579803 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.482241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAG GGAAACGCTT CGATGCGATC CTGCTCGCCG CCGGCTTGGC TGTCGGTGTC
GTCTCCGCTC CGTCGGAAGC GCTGGCGCAG TCGCGCCTGA GGGACCTCAT CAACCGGCTG
CGCGGCCAGA CGATGCCGGA AGGCATCGCC AAGTCGAACG GCCGGATCGA GGCGACCCAG
GTCGATGTCG CCGCGAAATA TGCCGGCCGG ATCGCGCAGC TCCTCGTCAA GGAGGGCGAC
GAGGTGAGCG CCGGGCAGGT CGTCGCCACG ATCTCATCGC CCGAGACCGA GGCGCAGCTC
CGCGGCGCGC AGGCCCAGGT GCTGCGCGCC AAGAAGAGCC TCGCCGAGGC CGTCGCCCTG
ATCGCCCAGC GCAACAGCGA CCTCACCTTC GCCGACGCTG ACTACAACCG CGGCAAGGAG
CTGGTCGGCA AGGGCTATAT GACCAAGCAG ATCTTCGACC AGCGCAAGGC CAAGGCCGAA
GCCGCCAAGG CGGCGCTCGA CGCCGCCAAG GCGCAGGAGG ATCAGGCCAA GTTCGCCGTG
CAGAGCGCCG AGGCCGATGT GCAGCGGTTG CAGGCCGTGC TGGTCGATCT CGTGCTGCGG
GCGCCCCGCG ACGGGCGGGT GCAGTACCGG CTGGCGCGGG AGGGCGAGGT CGTGGGCGCC
GGCACCCGCA TCCTGACGCT GCTCGACCTC GCGGACGTCT ACATGACGAT CTACCTGCCG
GCGGCGCAGG CCGGCCCGCT CGCACTCAAC GACGAAGCGC GCATCATCCT CGATCCGATT
CCGCAATACG TCGTGCCGGC AACGATCAGC TTCGTGGCCG CCGACGCGCA GTTCACGCCC
AAAAGCGTCG AGACCGAGGA GGAGCGCGAG AAGCTCACCT TCCGCATCAA GCTCCAGATC
GATCCGCAGG TGCTGAAGAC CTACCGCAAG CGGGTGAAGA CCGGCGTGCG CGGCATCGGG
TTCGTGCGGA TCAAGGCCAA CGTCGCCTGG CCGCCCGACC TTGCCGTGAA GCTGCCGTGA
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| Protein sequence | MSRGKRFDAI LLAAGLAVGV VSAPSEALAQ SRLRDLINRL RGQTMPEGIA KSNGRIEATQ
VDVAAKYAGR IAQLLVKEGD EVSAGQVVAT ISSPETEAQL RGAQAQVLRA KKSLAEAVAL
IAQRNSDLTF ADADYNRGKE LVGKGYMTKQ IFDQRKAKAE AAKAALDAAK AQEDQAKFAV
QSAEADVQRL QAVLVDLVLR APRDGRVQYR LAREGEVVGA GTRILTLLDL ADVYMTIYLP
AAQAGPLALN DEARIILDPI PQYVVPATIS FVAADAQFTP KSVETEEERE KLTFRIKLQI
DPQVLKTYRK RVKTGVRGIG FVRIKANVAW PPDLAVKLP
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