| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0533 |
|---|
| Symbol | |
|---|
| ID | 6309016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 571051 |
|---|
| End bp | 573438 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642649234 |
|---|
| Product | Kojibiose phosphorylase |
|---|
| Protein accession | YP_001923246 |
|---|
| Protein GI | 188579801 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.704179 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCC CGCGCCTGAT CCCGCCCGTC GACATCTTTC CCCCGAACCC CTGGGCGATC
GAGGCCGTCC GCTACGACGG CCGGATGGCG CGCGAGCTGA CCGGGCAGGC GGAGACCATG
TTCGCCCTGT CGAACGGCTA TCTCGGGATG CGCGGGGTCA CCGAAGAGGG CAGTCCGGTC
CGGGAAGCGG GCACCTACCT CAACGGCTTC TACGAGAACC GCCCGATCTC CTACGGCGAG
CGGGCCTACG GCTTCCCCAC GGTGGGCCAG AGCATTCTGA ATTGTCCCGA CGGGACGGTG
ATGAAGCTCT TCGTCGATGA CGAGCCCCTC ATCCTGCCGG ACGCGGAGAT CCTCTCGTAC
CGGCGGATCC TCGATTTCCG CGGCGGGACC CTGAACCGGG ACGTGCGCTG GGTGACGCCG
TCGGGCAAGC GCCTGCACCT GCGGACGACC CGGCTCGTCT CGCTGGCGCA TCGCCATCTC
GCCGCGATCG CCTACGAACT GACCGCGGAG AATGCCGCGG CGGAGGTGGT GATCACGTCC
GAATTGCGCA ACGACCAGCC CCTGGCCACC GACACCTCCG ACCCCCGCAT GGCGGAGGGC
TTCGTCGGAC GCGTCCTGCA ACCGACCGGA ACCCGGTCCG AGGCGCTGCG CGCGATCCTC
TCCTATCGCA CCGGCAGTTC CGGGCTGGTG CTCGGCTGCG GCATGGACCA TGTCGTCGAG
GCCGATTGTG CGCTCGCGGC CCAGGCGGGC TGCGACGACG ATCTGGCCAC GGTCGTCTTC
CGCGGCGTTC TCGCGCCGGG CCGGACGATC CGCATCCACA AATACCTGAG CTACCACTAC
GCCAGCGGCG CGGATCCCGC CGAGATCCGC TCACAGGTGG CCTGGACCCT GGACCGGGCG
GTGGAGAGCG GCTTCCCGGC GATCCTCGCC CGCCAGGGAC AGGAGACCGC CCGCTTCTGG
GAGCGAGCGG ACGTCACGGT CGAATCCGTC AACCCGCGCA GTCAGCAGGT GATCCGCTGG
AACCTGTTCC AGTTGATGCA AGCCTCGGAG CGGGCCGAGG GGCACGGCAT CGCCGCCCGT
GGGCTCACCG GGCGGACCTA CGAAGGCCAC TACTTCTGGG ACACCGAGAT CTACGTCCTT
CCTTTCCTGA TCTACACCAA CCCGCCGATG GCGCGCAGCC TGCTCAAGGT CCGCTACGAC
ATGCTCGACA GCGCCCGCGC CCGCGCCCGG GAACTCGGGC AGCGCGGCGC GACCTTCCCC
TGGCGGACCA TCAACGGGGA AGAGGCGTCG GCCTATTACG CGGCGGGGAC GGCGCAGTAT
CACATCAATG CCGACATCGC TTACGCTCTG CGCAAATACG TCGAGGTCAG CGGCGATGTG
GATTTCCTCT GCCGCTACGG CGCCGAGATC CTCGTCGAGA CCGCGCGCCT CTGGTGCGAT
CTCGGCTTCT TCTCAGACCG GATGGACGGA CGCTTCTGCA TCCACGGCGT GACCGGGCCG
GACGAATACA CGGCGATCGT CAACAACAAC TGCTTCACCA ACCTGATGGC GCGGGAGAAC
ATGCGCTACG CCGCCGAGAC CGTGCGGATG CTGAAGCGCG ACTACCCCGA CAGCTTCGAC
GCCCTCGTCC GCCGCACCCA CCTCGACGCC GACGAGCCCG AGGCGTGGGA TCAGGCGGCC
GAGCGGATGT ACCTGCCCTA CGACGAGCGG CTGAAGGTGC ATCCGCAGGA CGACGCCTTC
CTCGATCTGG AGAAGTGGGA CTTCGCCGCG ACGCCGGAGG ATCACTACCC GCTCCTGCTG
CACTACCATC CGCTCAACCT GTACCGTTCG CAGGTGATCA AGCAGGCCGA CACGGTTCTA
GCGCTGTTTC TCTTGAGCGA GCAGTTCACG CTCGAGGCCA AGCGGCGGAA CTTCGCCTAT
TACGATCCGC TGACTACACA CGACTCGTCC CTTTCGGTCT GCATCCAGAG CATCGTCGCC
AACGAGATCG GATTGCGGGA CAAGGCGATC CATTACTTCA ACTTCGCCGT CGCGATGGAC
ATCTCCGACC TCGGCGGCAA CATGATGCAC GGCGCCCATA TCGCCGCCAT GGGCGGCACG
TGGCTCGCGA TGATCTACGG CTTCGCCGGG ATGCGCGACG CGCACGGGCG CCTCACCTTC
AACCCGTGCC TGCCCGAGGC CTGGACGCGG CTGGGCTTCT GCCTGCAGGT GCGCGGGCAG
ACGATCCGCA TCGAGATCAC CCACAGTACC GCCACCTACG GACTGGTGGC CGGCGCGGGG
CTGACCCTGT GGCACGGCGA GGATTGCGTC CGCCTGTCGG AGGCGACGCC GTCCGTGACG
AAGCCGGTCG GCGGGGCCGC GGGGGGCGCC GATGCCTCGG CGCCCTGA
|
|---|
| Protein sequence | MLRPRLIPPV DIFPPNPWAI EAVRYDGRMA RELTGQAETM FALSNGYLGM RGVTEEGSPV
REAGTYLNGF YENRPISYGE RAYGFPTVGQ SILNCPDGTV MKLFVDDEPL ILPDAEILSY
RRILDFRGGT LNRDVRWVTP SGKRLHLRTT RLVSLAHRHL AAIAYELTAE NAAAEVVITS
ELRNDQPLAT DTSDPRMAEG FVGRVLQPTG TRSEALRAIL SYRTGSSGLV LGCGMDHVVE
ADCALAAQAG CDDDLATVVF RGVLAPGRTI RIHKYLSYHY ASGADPAEIR SQVAWTLDRA
VESGFPAILA RQGQETARFW ERADVTVESV NPRSQQVIRW NLFQLMQASE RAEGHGIAAR
GLTGRTYEGH YFWDTEIYVL PFLIYTNPPM ARSLLKVRYD MLDSARARAR ELGQRGATFP
WRTINGEEAS AYYAAGTAQY HINADIAYAL RKYVEVSGDV DFLCRYGAEI LVETARLWCD
LGFFSDRMDG RFCIHGVTGP DEYTAIVNNN CFTNLMAREN MRYAAETVRM LKRDYPDSFD
ALVRRTHLDA DEPEAWDQAA ERMYLPYDER LKVHPQDDAF LDLEKWDFAA TPEDHYPLLL
HYHPLNLYRS QVIKQADTVL ALFLLSEQFT LEAKRRNFAY YDPLTTHDSS LSVCIQSIVA
NEIGLRDKAI HYFNFAVAMD ISDLGGNMMH GAHIAAMGGT WLAMIYGFAG MRDAHGRLTF
NPCLPEAWTR LGFCLQVRGQ TIRIEITHST ATYGLVAGAG LTLWHGEDCV RLSEATPSVT
KPVGGAAGGA DASAP
|
|---|
| |