Gene Mpop_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_0530 
Symbol 
ID6309013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp567414 
End bp568676 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content69% 
IMG OID642649231 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_001923243 
Protein GI188579798 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.809556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.399021 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGGG TGGTGATCAC GGGGCTGGGG ATGGTGTCGC CGCTGGGTGG CAACGTCGAG 
CACACCTGGA GCCGCCTCAT CGCCGGTGAC AGCGGCGCCG CCGCGGTCAC CGCCTTCCAG
ACCGACGATC TCGCCTGCCG GATCGCCTGC ACCTTGCCCT TCGGCGACGG GTCCAACGGC
ACCTTCAACC CCGACACGTG GATGGAGGTG AAGGAGCAGC GCAAGGTCGA TCCCTTCATC
GTCTACGCCA TGGCCGCCGC CGGCATGGCG CTCGACGATG CCGACTGGCA CCCGAAATCC
GACGCGGATC AGGAGGCCAC CGGCGTCCTG ATCGGCTCGG GCATCGGCGG CATCGGCACG
ATCTACGATG CCTCCGTGAC CCTTCACGAG AAGGGCCCGC GGCGCATCTC GCCGTTCTTC
ATCCCCGGCC GCATTATCAA CCTCGCCTCG GGGCAGGTCT CGATCCAGCA CGGGCTGAAG
GGCCCGAATC ATGCGGTCGT CACCGCCTGC TCCACCGGCG CGCACGCCAT CGGCGACGCC
TCGCGGCTGA TCGCGCTCGG CGATGCCGAC GTGATGGTGG CCGGCGGCAC CGAGGCGCCG
GTCAACCGGC TGTCGCTCGC CGGCTTCGCC GCCTGCCGCG CGCTCTCCAC CGGCTTCAAC
GACGAGCCAA CCAAGGCCTC CCGTCCCTAC GACCGCGACC GCGACGGCTT CGTCATGGGC
GAGGGCGCGG GCATCGTCGT GCTCGAAGAG TACGAGCATG CCAAGGCGCG CGGCGCCAAG
ATCTATGCCG AGGTGATCGG CTACGGCCTG TCGGGCGATG CCTACCACAT CACCTCGCCT
GCCCCGGACG GCGACGGCGG CTACCGCTGC ATGAAGGCCG CGGTGAAGCG GGCCGGGATC
GACCCGTCCG AGATCGACTA CATCAACGCC CACGGCACCT CGACCCCGCT CGGCGACGAG
CTGGAGCTGA AGGCGGTCGA GCGGCTGCTC GGCGAGTCGG CCTCCAAGAC GTCGATGTCC
TCCACCAAAT CGGCGATCGG CCACCTGCTC GGCGCGGCCG GTGCGGTCGA AGCGATCTTC
TCCGTGCTGG CGATTCGCGA CGGGGTGATG CCGCCGACGC TGAACCTCGA CAACCCGTCG
GTCGAGACCG CCATCGACCT CGTGCCGCAC GAGGCCAAGC GCAAGCGCGT CGATACGGTG
CTCTCGAACT CCTTCGGCTT CGGCGGCACC AACGCCTCGC TGCTGATGCG CCGGGTCGGC
TGA
 
Protein sequence
MRRVVITGLG MVSPLGGNVE HTWSRLIAGD SGAAAVTAFQ TDDLACRIAC TLPFGDGSNG 
TFNPDTWMEV KEQRKVDPFI VYAMAAAGMA LDDADWHPKS DADQEATGVL IGSGIGGIGT
IYDASVTLHE KGPRRISPFF IPGRIINLAS GQVSIQHGLK GPNHAVVTAC STGAHAIGDA
SRLIALGDAD VMVAGGTEAP VNRLSLAGFA ACRALSTGFN DEPTKASRPY DRDRDGFVMG
EGAGIVVLEE YEHAKARGAK IYAEVIGYGL SGDAYHITSP APDGDGGYRC MKAAVKRAGI
DPSEIDYINA HGTSTPLGDE LELKAVERLL GESASKTSMS STKSAIGHLL GAAGAVEAIF
SVLAIRDGVM PPTLNLDNPS VETAIDLVPH EAKRKRVDTV LSNSFGFGGT NASLLMRRVG