| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0502 |
|---|
| Symbol | |
|---|
| ID | 6308929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 535917 |
|---|
| End bp | 538061 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642649203 |
|---|
| Product | Oligopeptidase B |
|---|
| Protein accession | YP_001923215 |
|---|
| Protein GI | 188579770 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1770] Protease II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0140274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0418806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCG AGCCCCCTCC CTTCGCTCTG CCGCCCGCGG CGCCCAAGGC GGAGGAACGT
CCGCACGCCT TCGAACTCTT CGGCCGGCGC GTCGAGGATC CGTTCGCGTG GCTCAAGGCC
GAGAACTGGC GGGCCGTGCT GAAGGACCCC TCGGCGCTCG CCCCCGACAT CCGCGCCTAT
CTCGACGCCG AGAACGCCTA TGCCGAGGCG GCGCTGAGCG GCGCCGCCGC CCTGCGCAAG
ACCCTGGTCG CCGAGATGCG CGGACGCATC CGCGAGGACG ACGCCTCGGT GCCCGAGCCC
GACGGGCCGT TCGCCTACTA CTCCCGCCAT CGCGAGGGTG GCCAGCATCC GCTGATCTGC
CGCCGGCCGC GCACCGTTCA CCGCATCGCC GAGGAGCCCG AGGACGGCGA GATCGGCGAG
CAGATCCTGC TCGACGGCGA TAAGGAGGGC GAGGGCCTCG CCTTCTTCGA GATCGCCGGC
GCGGCTCATT CCGACGACCA CCGCCTGCTG GCCTGGGGCG TCGACACCAA GGGTTCGGAA
CTTCACACCA TCCGCGTACG CGACCTCGAC ACCGGCGAGG ACCGCCCGGA GCGGGTCGAA
TCGACCGCGG GCGACGCGGT GTGGAACGCC GTCGGCACCG CCTTCTTCTA CGTTGCCCTC
GACGAGAACC ACCGTCCGGC CCGCGTCATG CGCCACCGCC TCGGCACGGA TCAGGCGGAG
GACACGACCG TCTACGAGGA AGCCGATCCG GGCTTCTTCG TGAATATCGG CCGCACCCAG
TCCGGCACCT ATCTCACCGT CACCGCGAGC GACCACGAGA CGGCGGAAGT CCACCTGCTC
GACCGGGCCG ACGACGAGGG CCCGCTCCGT TGCGTCGCAC CCCGCGAGGA GCGGCTGATC
TACTCGGTCG AGCACTGGGG CTCGTATCTC GTCATTCTGA CGAATGCCGA CGGCGCGGTG
GACTTCAAGA TCGTCACCTG TCCCCTCGAC GCGACGGCGC GGGAGAACTG GCGCGACGCG
GTGCCCTACC GCCCCGGCGT GATGATCCGG CACCTGCACG TGCTCGGCAA CCACCTCGTG
CGGCTCGAAC TGGAGAACGC CCTGCCGCGC ATCGTCGTGC GCGACATGAA GGGCGAGGAG
CACACCGTCT CCTTCGCGGA GGAAGCCTAC TCGCTCGGCC TGCTGCCCGG CTACGAGTTC
GAGACGGCAC GCATCCGCTT CACCTACTCG TCGATGACGA CGCCGGCCGA GACCTACGAT
TACGACTGCG TTACCCGCGC CCGCATCCTG CGCAAGCGCC AGACCGTGCC GAGCGGCCAC
GAGCCCGCCG ACTACGTCAC CCGTCGCCTG TTCGCGACCG CGCCGGACGG GGAAAGCGTT
CCGATCTCGC TCCTGCATCG CCGCGGACTC GCCCTCGACG GCTCGGCGCC GCTGCTGCTC
TACGGCTACG GCTCCTACGG CACGCTGATG CCGGCTGGGT TCCGCACCAA CCTGCTCAGC
CTCGTCGATC GCGGCTTCGT CTACGCCATC GCCCATATCC GCGGCGGCAC CGAGAAGGGT
TGGAACTGGT ATCTCGAGGG CAAGCGCGAG AAGAAGCCCA ACACCTTCAC CGACTTCGTC
GCCTGCGGCC GGGCGCTGAT CGAGGCGGGC TATACGCAGC AGGGCCGCAT CGTCGCCCAT
GGCGGCAGCG CCGGCGGCAT GCTGATGGGC GCGGCCGCGA ACCTCGCGCC GGAACTGTTC
GCTGGCATCG TCGCCGACGT GCCCTTCGTC GACGTGCTCA ACACGATGCT CGACGCGGAC
CTGCCGCTCA CCCCGCCGGA ATGGCCCGAA TGGGGCAATC CGGCCGAGAG CGAGGCGGCG
TTCGAGACGA TCCTGTCCTA CTCGCCCTAC GACAATGTCG CCGCCAAGGC CTATCCGGCC
ATCCTCGCGC TCGGCGGCCT CACCGACCCC CGCGTGACCT ACTGGGAGCC GGCCAAATGG
GTCGCCCGGC TGCGCGCCAC CATGACCGGC GGCGGTCCGG TTCTCCTCAA GATCAACATG
GAGGCCGGAC ATGGCGGCGC CGCCGGCCGC TTCGACCGCC TGGAGGAGGT CGGCCTGATC
TACGCCTTCG CCCTGATGGC GGCGCGCGCC GCAAAGGCGG CCTGA
|
|---|
| Protein sequence | MTFEPPPFAL PPAAPKAEER PHAFELFGRR VEDPFAWLKA ENWRAVLKDP SALAPDIRAY
LDAENAYAEA ALSGAAALRK TLVAEMRGRI REDDASVPEP DGPFAYYSRH REGGQHPLIC
RRPRTVHRIA EEPEDGEIGE QILLDGDKEG EGLAFFEIAG AAHSDDHRLL AWGVDTKGSE
LHTIRVRDLD TGEDRPERVE STAGDAVWNA VGTAFFYVAL DENHRPARVM RHRLGTDQAE
DTTVYEEADP GFFVNIGRTQ SGTYLTVTAS DHETAEVHLL DRADDEGPLR CVAPREERLI
YSVEHWGSYL VILTNADGAV DFKIVTCPLD ATARENWRDA VPYRPGVMIR HLHVLGNHLV
RLELENALPR IVVRDMKGEE HTVSFAEEAY SLGLLPGYEF ETARIRFTYS SMTTPAETYD
YDCVTRARIL RKRQTVPSGH EPADYVTRRL FATAPDGESV PISLLHRRGL ALDGSAPLLL
YGYGSYGTLM PAGFRTNLLS LVDRGFVYAI AHIRGGTEKG WNWYLEGKRE KKPNTFTDFV
ACGRALIEAG YTQQGRIVAH GGSAGGMLMG AAANLAPELF AGIVADVPFV DVLNTMLDAD
LPLTPPEWPE WGNPAESEAA FETILSYSPY DNVAAKAYPA ILALGGLTDP RVTYWEPAKW
VARLRATMTG GGPVLLKINM EAGHGGAAGR FDRLEEVGLI YAFALMAARA AKAA
|
|---|
| |